Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1757 |
Symbol | typA |
ID | 5408846 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 1678146 |
End bp | 1679954 |
Gene Length | 1809 bp |
Protein Length | 602 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640871424 |
Product | GTP-binding protein TypA/BipA |
Protein accession | YP_001407268 |
Protein GI | 154148859 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1217] Predicted membrane GTPase involved in stress response |
TIGRFAM ID | [TIGR00231] small GTP-binding protein domain [TIGR01394] GTP-binding protein TypA/BipA |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGAAAATA TACGAAATAT TGCAGTTATT GCGCACGTAG ATCACGGAAA AACGACAATT GTAGACCAAC TTTTAAAGCA ATCAGGAACT TTTAATGATC ACGAAGTCGT AGGCGATCGC GTGATGGATA GTAACGATAT AGAAAAAGAG CGTGGAATTA CTATTTTATC AAAAAATACT GCCATTAATT ATAATGGCGT TAAAATCAAT ATCATAGATA CTCCGGGTCA CGCCGATTTT GGCGGAGAAG TAGAACGCGT GCTAAAAATG GTTGATGGCG TTTTGCTTTT GGTTGACGCA CAGGAAGGCG TAATGCCTCA AACTAAATTC GTCGTTAAAA AGGCGCTTTC TTTAGGTTTG CGTCCGATTG TCGTAATAAA TAAGATTGAT AAACCGGCTG CAAATCCTGA CAAAGTAATA AATGAAATTT TTGATCTTTT TGTAGCGCTT GGCGCAAATG ATGAACAACT TGATTTTCCG GTTATTTATG CGGCTGCAAA AAACGGTTAT GCAAAATATG CTTTAGACGA TACAAATAAC GATATGAAAC CGTTATTTGA GACTATTATA GCCCATGTGC CAAGTCCTAG CGGAAAAGAT GAAAATCCTT TGCAACTTCA AGTTTTTACG CTTGATTATG ACAATTATGT AGGTAAAATC GGCATTGCAA GAATTTTTAA CGGCAAAATT TCAAAAAATC AGAATGTAAT GCTTATAAAA GCCGACGGCA CAAGACAAAC CGGAAGAATC AGTAAGCTTA TCGGCTTTTT GGGACTTCAA AGACGTGAAA TAAACGAAGC AGGAGTTGGT GACATCGTAG CAATTGCCGG ATTTGATGCG CTTGATGTAG GAGACAGTAT AGTAGATCCA GCACATCCTA AACCGCTTGA AGCTTTGCAT ATCGAAGAAC CGACTTTAAG CGTAATTTTT AGCGTAAATG ATGGACCTTT GGCAGGAACG GAAGGAAAAT TTGTAACTTC AAATAAAATT GACGAACGTT TGGAAAACGA AATGAAAACA AATATTGCCA TGCGTTATGA AAATGTAGGA GAAGGAAAAT TTAAAGTAAG CGGCAGAGGC GAACTTCAAA TTACAATCTT AGCTGAAAAT ATGCGTAGGG AGGGCTTTGA ATTTTGTCTT GGAAGACCCG AAGTTATTGT AAAAGAAATA AATGGCGTAA AATGTGAACC TTTTGAGCAT TTGGTTATTG ACGCGCCTGA TGAGTGTACC GGAGTTGTTA TTGAAAAGCT TGGTAAACGC AAAGCCGAAA TGAAAACAAT GGTTCCTACG GGTGATGGCC AAACACGCCT TGAGTTTGAG ATTCCGGCGC GCGGATTAAT AGGCTTCAGG TCTCAATTTA TGACGGATAC AAAAGGCGAG GGCATTATGA ATCATAGCTT TTTGGAATTT CGTCCTATGA TAGGAAATGT CGAGCATAGA ACAAACGGTT CATTGGTAAG TATGGAAAAC GGTGTTGCGC TTGCTTATTC TCTTTGGAAT CTGCAAGATC GCGGAGTTCT TTTCATAGCA CCACAAGCTA AGGTTTATAT AGGTATGATA ATTGGTGAGC ATAGTAGACC GAACGATTTG GACGTAAATC CTATCAAAGG CAAAAATCTT ACAAATGTCA GAGCTAGCGG AAGTGATGAC GCGATAAAAT TGGTTCCGCC AAGAATTTTA AATTTGGAGC GAGCGCTTGA ATGGATTGAA GAAGACGAGC TTGTTGAGGT TACGCCGCAA AATATTCGTG TTAGAAAGCG CTATTTGGAT CCTATTACAC GCCGTAGAAT GGCAAATAAA ACAAAATAA
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Protein sequence | MENIRNIAVI AHVDHGKTTI VDQLLKQSGT FNDHEVVGDR VMDSNDIEKE RGITILSKNT AINYNGVKIN IIDTPGHADF GGEVERVLKM VDGVLLLVDA QEGVMPQTKF VVKKALSLGL RPIVVINKID KPAANPDKVI NEIFDLFVAL GANDEQLDFP VIYAAAKNGY AKYALDDTNN DMKPLFETII AHVPSPSGKD ENPLQLQVFT LDYDNYVGKI GIARIFNGKI SKNQNVMLIK ADGTRQTGRI SKLIGFLGLQ RREINEAGVG DIVAIAGFDA LDVGDSIVDP AHPKPLEALH IEEPTLSVIF SVNDGPLAGT EGKFVTSNKI DERLENEMKT NIAMRYENVG EGKFKVSGRG ELQITILAEN MRREGFEFCL GRPEVIVKEI NGVKCEPFEH LVIDAPDECT GVVIEKLGKR KAEMKTMVPT GDGQTRLEFE IPARGLIGFR SQFMTDTKGE GIMNHSFLEF RPMIGNVEHR TNGSLVSMEN GVALAYSLWN LQDRGVLFIA PQAKVYIGMI IGEHSRPNDL DVNPIKGKNL TNVRASGSDD AIKLVPPRIL NLERALEWIE EDELVEVTPQ NIRVRKRYLD PITRRRMANK TK
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