Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1693 |
Symbol | |
ID | 5408367 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 1613567 |
End bp | 1614364 |
Gene Length | 798 bp |
Protein Length | 265 aa |
Translation table | 11 |
GC content | 29% |
IMG OID | 640871361 |
Product | putative beta-lactamase HcpC (cysteine-richprotein C) |
Protein accession | YP_001407205 |
Protein GI | 154148335 |
COG category | [R] General function prediction only |
COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA TTTGTTTTTT ATTTATTTGT TTTGGAATTT TGTTTGCAAG TGATACAAAT CTTCAAAATA AATGTAATAA GAACGATGCC GGCGCATGCC ATAACTTAGC GGTACAATTT TATGAAAGCA AAGATTACCA AAATGCTTTT AAATATTTCA AAAAAGCTTG TGAGCTAAAA TTTAATCAAA GCTGCTTTAA TATAGGACTT ATGTCTGAGC AAGGAAAAGG CACTCCAAAA GATGAATTTA AGGCTTTTGA TATGTTTAGC AAAACTTGTA TAAAAAATAA AAAAGGTAAA TATAATCCAT ATTTCGGATG TGCAAATTTA GCCTTTTTGT ATCTTGACGG ACGCGGTGTA AGACAAAATT TTAAAACAGG AATAAAAATT TTAAATGATA CCTGCAAAGA TGGCAATCTT GCAAATTGCG AAATTTTAAG CAATATTTAC AATGATGGAT ATTTAGGAAT TACAAAAGAT ACAAATAAAG CTATGGAAAT TTTAGAGTTT AGCTGCAAAA AAGGTGAAAT AAATGCCTGC CTCAAAATTT CAAACAATCT TCTTGATGGT AATATCACGG ATCAGAAAAA AATACAAAAA GGCATTTCTA TGCTTGAAAA TGTTTGTAAA CTTAAAAATA GCGAAGCTTG CCTGAAACTT GGAATTTATT ACACAAACGG AAATTTTGTA AAACAAAATC TGACTGTAGC TAAAGAATTT TTCGGTATCG CCTGCGATTT ACGAAATGAA AAAGGTTGCC AAAGCTACAA AATTTTAAAT GAAAACGGAG TCAAATAA
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Protein sequence | MKKICFLFIC FGILFASDTN LQNKCNKNDA GACHNLAVQF YESKDYQNAF KYFKKACELK FNQSCFNIGL MSEQGKGTPK DEFKAFDMFS KTCIKNKKGK YNPYFGCANL AFLYLDGRGV RQNFKTGIKI LNDTCKDGNL ANCEILSNIY NDGYLGITKD TNKAMEILEF SCKKGEINAC LKISNNLLDG NITDQKKIQK GISMLENVCK LKNSEACLKL GIYYTNGNFV KQNLTVAKEF FGIACDLRNE KGCQSYKILN ENGVK
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