Gene CHAB381_1609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1609 
Symbol 
ID5408385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1532700 
End bp1533683 
Gene Length984 bp 
Protein Length327 aa 
Translation table11 
GC content39% 
IMG OID640871279 
Productthiamine biosynthesis protein:ExsB 
Protein accessionYP_001407132 
Protein GI154149314 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGCGT TAGCGCTTTT TAGCGGCGGG CTTGATTCAA TGCTTGCAGC AAAAATTATC 
TCTGATATGG GCGTTGAGGT GACCGCACTT CATATTGATA TAGGTTTTGG AAGCAAGGAT
GATAAAAGTG AAATTCTTGC GCGCCGCGCC GGTGTTGCGG GCGCTGATTT TGCAATCATC
GATGTACGCG AAGAGTATCT TAAAAATGTG CTTTTCAGTC CTAAATATGG ATATGGCAAA
CATTTTAATC CTTGTATTGA TTGTCACGGA TTTATGTTTA GAACAGCGCT TAACTCTTTG
GCACGTTTCG GGGCCGATTT TATTATCACG GGAGAGGTTT TAGGACAGCG TCCGATGAGT
CAAAGAAGTG CCGCCATAAA TCAGGTAAAT CATTTAAGTG GCGATAGCGA TTTGATTGTA
CGTCCGCTTT GTGCGAAACT TTTATCGCCA AGCAGACCTG AGATTTTAGG CTGGATTGAT
CGCGAAAAAT TGCTTGATAT AAGCGGTCGC TCTCGTGTAA GACAGATGGA ACTTGCCAAA
AAATTCGGTT TTAATGATTT TGAAACACCT GCCGGAGGAT GTTTGCTTAC GCTTGAAAAT
TTCAGCAATA AAATCAAAGA CGCACTGAAA TTTGAAAAAA TCGAGTGCGT AAAAGACGCT
GAAATTTTAA AATTCGGTCG CCATTTGCGC CTTTTTGGCG GTGCAAAAAT GGTCGTTGGA
AGAAACGAAG ATGAAAACAA TAAACTTGAA ATGATAAATA ATCCAAAATT TACAAAAATT
GATTTTATAG ATGACATCGT AGGCGCAAGC AGTTTTTTAA TAAAAACAGC TGGCACGGAA
GATAAAAATC TTGCCGCCAA AATCGCGCTT ACTTATGCTA AAACGGATTT CAGTAAAATT
TACAGAGTAA AAATCGCAGA TGAAATTTTT AACGCTTCGC CGTTTGAAGA TAAAAAAATA
CTATCTAAAT TTTTAATTTT GTAA
 
Protein sequence
MKALALFSGG LDSMLAAKII SDMGVEVTAL HIDIGFGSKD DKSEILARRA GVAGADFAII 
DVREEYLKNV LFSPKYGYGK HFNPCIDCHG FMFRTALNSL ARFGADFIIT GEVLGQRPMS
QRSAAINQVN HLSGDSDLIV RPLCAKLLSP SRPEILGWID REKLLDISGR SRVRQMELAK
KFGFNDFETP AGGCLLTLEN FSNKIKDALK FEKIECVKDA EILKFGRHLR LFGGAKMVVG
RNEDENNKLE MINNPKFTKI DFIDDIVGAS SFLIKTAGTE DKNLAAKIAL TYAKTDFSKI
YRVKIADEIF NASPFEDKKI LSKFLIL