| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1601 |
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| Symbol | nifJ |
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| ID | 5408471 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 1525472 |
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| End bp | 1529023 |
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| Gene Length | 3552 bp |
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| Protein Length | 1183 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640871271 |
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| Product | pyruvate:ferredoxin (flavodoxin) oxidoreductase |
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| Protein accession | YP_001407124 |
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| Protein GI | 154149287 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0674] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, alpha subunit
[COG1013] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, beta subunit
[COG1014] Pyruvate:ferredoxin oxidoreductase and related 2-oxoacid:ferredoxin oxidoreductases, gamma subunit |
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| TIGRFAM ID | [TIGR02175] 2-oxoacid:acceptor oxidoreductase, gamma subunit, pyruvate/2-ketoisovalerate family
[TIGR02176] pyruvate:ferredoxin (flavodoxin) oxidoreductase, homodimeric |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.00131984 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA TCATGAAGAC TATGGACGGA AACGAAGCTG CTGCTTATGT TTCTTACGCT
TTTACGGAGG TGGCAGGAAT TTATCCTATT ACACCTAGTT CGCCGATGGC TGATTATACT
GATGTCTGGG CAAGCCGTGG CAAAAAAAAT CTTTTTGGAA TGCCCGTTAA AGTTGTTGAA
ATGCAAAGTG AAGGCGGCGC TGCCGGAACT GTGCATGGTT CGCTTCAAGC AGGTGCGCTT
ACTACGACCT ATACAGCCGC ACAAGGTTTG CTTTTAAAAA TTCCGAATAT GTATAAAATT
GCAGGACAGA TGCTTCCGGG AGTTATCCAC GTTGCAGCCA GATCGCTTGC TGCACAAGCA
CTTTCAATCT TTGGAGATCA CCAAGATGTT TATGCCTGTA GACAAACCGG TTTTGCAATG
CTTTCGAGTG CAAGTGTACA GGAAGTTATG GATATCGGCG GTATTGCTCA CTTAGCCGCA
ATCAAAGGTC GCGTACCATT TCTACACTTC TTCGACGGTT TTCGCACAAG CCACGAAATT
CAAAAAATAG AGGTTATGGA TTACGCAGAT TTCGATAAAC TTTTAGATAG AAAAGCCGTT
CAAGCTTTTC GCGATAATGC ACTGAACTCA GAACATCCAA AAACACGTGG AACTGCACAA
AACGATGATA TATATTTCCA AACAAGGGAG CTTTCAAATA AATATTATGA AGCAGTTCCT
GATATTGTAG CCGATTATAT GGCTGAAATT TCAAAAATCA CAGGCAGAGA TTATAAACCG
TTTAATTATT ACGGCGCAAA AGACGCTACA AATATCATAG TTGCAATGGG TTCTGTAAAT
GAGGCGCTGG AAGAAGTTGT GGATTATTTG ACAAGCAAAG GCGAAAAAGT CGGCGTTATA
AAAGTTCATC TTTATCGACC GTTCAGTCTA AAATATTTCT TTGACGTATT ACCAAAAAGC
GTTGAAAGAA TCGCTGTTTT AGACCGCACG AAAGAGCCTG GAAGTATTGG CGAACCGCTT
TATTTGGATA TAAAATCAGC ATTTTACGGA AATAAAAAAG AACCGTTGAT TATAGGCGGA
CGCTACGGCT TGAGTTCAAA AGACGTTGAT CCTGCACAAC TTATCGCAGT TTTTGAAAAT
TTAAAATCAA AAGAGCCGAA AAATCGCTTT ACAGTCGGTA TTGATGATGA TGTTACTTTT
ACTTCACTAA AAGTAGGCAA AAAAATTTCA CTTGGCGATC AAGACGCGAT AGAGTGTTTA
TTTTATGGAC TTGGAGCAGA CGGAACTGTA GGAGCTAATA AAAACTCAAT TAAAATCATC
GGAGATAAAA CCGATCTTTA TGCGCAAGCT TATTTCGCTT ATGACAGTAA AAAATCAGGC
GGATATACAA GAAGCCATTT AAGATTTGGC AAAAAACCGA TCCGCTCAAC TTATCTGGTA
TCAAATCCGC ACTTCGTAGC TTGCTCGGTT GCGGCTTATC TTGATGTATA TGACGTAGTA
GATGGGATAC GTGAAGGCGG CACTTTTTTA TTAAATTCAA TTTGGGATGC AAAAGAGACG
ATTGAAAAAA TTCCAAACAA AGTAAAAAGA ATTTTAGCTG AGAGGAAAGC TAAATTTTAT
ATCCTGAATG CAACAAAACT TGCTTCTGAA ATAGGACTTG GAAACCGCAC AAATACAATT
ATGCAATCAG CATTTTTTAA ACTTGCAAAC ATAATTCCTT TTGATGACGC AAAAGCTTAT
ATGAAAGAGT ATGCTAAAAA AACTTACGGC AAAAAAGGCG ATAAAATTGT TCAAATGAAT
TATGATGCGA TTGACCGCGG TGCAGATGGA CTTATAGAGA TAAAAGTAGA TCCTGCGTGG
ATAAATCTTA AAGATGAAAC TACAAATGAA CACGATAAAT ACAAAGGTGA CAAATTTATA
GAATCTGTTG TAAAACCTAT AAATGCGGCA CGCGGCGATA AACTTCCTGT TTCAGCATTT
TTAGGACACG AAGACGGCAG TTTTGAAGCG GGCACTACAA AATATGAAAA ACGTGGTGTT
GGTGTAATGG TGCCAAAATG GATAAAAGAA AATTGTATCC AATGCAATCA ATGCGTTTTT
GTTTGCCCTC ATGCTGTAAT TCGCGCATTT TTGCTTGATG AAAAAGACGA ACAGAATTCA
CCTGAGAGTT TAAAACCTAA TTTGATTGAT GCAAAAGGCA AAGATGTAAA AGGGTATAAA
TATAAAATTC AAGTAAGCCC GCTTGATTGT ACAGGTTGCG AACTTTGCGC ACAAAATTGT
CCAAGCAAGG AAAAATCTCT TGTAATGGTT CCGCTTGAAG AAGAAATTGA CAATAAAGAA
CAAGAAAATG CCGATTATTT GTTTCAAAAT GTTACTTACA AATCGGATCT TACAGGAAAA
GAGAGTGTAA AAGGTATCGG TTTTGCAAAA CCTTATTTTG AATTTCACGG TGCGTGTCCT
GGATGCGGCG AAACACCTTA TATCACAGCA GTTTCAAGAT TATTCGGTGA CCATATGATT
GTAGCAAATG CGACAGGTTG CAGCTCGATT TACGGCGGCT CTGCACCTTC TATGCCTTAT
ACGCATGACG AAAACGACAG AGGTATCGCT TGGGCAAACT CACTTTTTGA AGATAATGCC
GAATTTGGTT TTGGTATGAG AGTGGCGAGC GAGACATTAA GACACCAAAT AGAAAATATA
ATGCTTGAAA CAAAAAAAGA TGTTCCAAAC GCACTTAGCG CACTTTATAC AGACTGGATA
GAAAACCGCA ACGACAGCCT TAAATCAGCC GAAATTCGTG ATCGCTTAAT TCCTTTGCTT
GAAGCGAATA AAAAAGAAAA AGGCGTAGCT GAAATTTTAG GTTTGAAACA ATATCTATCT
AAAAAATCTC AATGGATTAT AGGCGGTGAC GGCTGGGCTT ATGATATCGG TTATGGCGGA
CTTGATCACG TTTTGGCAAG CGGCGAAAAC ATAAATGTGC TTGTTCTTGA TACAGAAGTT
TATTCAAACA CAGGCGGACA AAGTTCAAAA GCAAGCCGCA CAGGTTCAAT AGCACAATTT
ACAGCAAGTG GAAAATCCGT CCAAAAGAAA GATTTAGGAC AAATTGCGAT GACTTACGGC
AACATTTTTG TAGCTCAAAT CAACTCAAAC GCAAGTCAGG CAAATATGAT AAAAGCCATC
CTGGCAGCCG AAGCATACGA CGGACCTAGC CTTATTATTT GTTACGCGCC TTGTATTTCG
CATGGTATAA AAGGCGGTTT GGCTAAATCA GGAAATCAAG CCGAACTTGC AACAAAATGC
GGATATTGGC CGACTTATAT ATTTAATCCT GAACTCTTAA AAAGCGGACA AAATCCTTTG
AAAATAACTT CGAAAGAGCC GGATTGGGAA CTTTATGATG AATTTTTGTC AAATGAAGTT
CGCTACAATG CGCTTAAGAA ATTTAATCCT GATCACGCAA GTGAGCTTTT AGAACAAAAC
AAAAAAGATT CTCAAAGAAG ATATCGCCAA CTGGTTAGAT TTTCAAAATC AGATTTCAGC
GATGAAATTT AG
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| Protein sequence | MSKIMKTMDG NEAAAYVSYA FTEVAGIYPI TPSSPMADYT DVWASRGKKN LFGMPVKVVE
MQSEGGAAGT VHGSLQAGAL TTTYTAAQGL LLKIPNMYKI AGQMLPGVIH VAARSLAAQA
LSIFGDHQDV YACRQTGFAM LSSASVQEVM DIGGIAHLAA IKGRVPFLHF FDGFRTSHEI
QKIEVMDYAD FDKLLDRKAV QAFRDNALNS EHPKTRGTAQ NDDIYFQTRE LSNKYYEAVP
DIVADYMAEI SKITGRDYKP FNYYGAKDAT NIIVAMGSVN EALEEVVDYL TSKGEKVGVI
KVHLYRPFSL KYFFDVLPKS VERIAVLDRT KEPGSIGEPL YLDIKSAFYG NKKEPLIIGG
RYGLSSKDVD PAQLIAVFEN LKSKEPKNRF TVGIDDDVTF TSLKVGKKIS LGDQDAIECL
FYGLGADGTV GANKNSIKII GDKTDLYAQA YFAYDSKKSG GYTRSHLRFG KKPIRSTYLV
SNPHFVACSV AAYLDVYDVV DGIREGGTFL LNSIWDAKET IEKIPNKVKR ILAERKAKFY
ILNATKLASE IGLGNRTNTI MQSAFFKLAN IIPFDDAKAY MKEYAKKTYG KKGDKIVQMN
YDAIDRGADG LIEIKVDPAW INLKDETTNE HDKYKGDKFI ESVVKPINAA RGDKLPVSAF
LGHEDGSFEA GTTKYEKRGV GVMVPKWIKE NCIQCNQCVF VCPHAVIRAF LLDEKDEQNS
PESLKPNLID AKGKDVKGYK YKIQVSPLDC TGCELCAQNC PSKEKSLVMV PLEEEIDNKE
QENADYLFQN VTYKSDLTGK ESVKGIGFAK PYFEFHGACP GCGETPYITA VSRLFGDHMI
VANATGCSSI YGGSAPSMPY THDENDRGIA WANSLFEDNA EFGFGMRVAS ETLRHQIENI
MLETKKDVPN ALSALYTDWI ENRNDSLKSA EIRDRLIPLL EANKKEKGVA EILGLKQYLS
KKSQWIIGGD GWAYDIGYGG LDHVLASGEN INVLVLDTEV YSNTGGQSSK ASRTGSIAQF
TASGKSVQKK DLGQIAMTYG NIFVAQINSN ASQANMIKAI LAAEAYDGPS LIICYAPCIS
HGIKGGLAKS GNQAELATKC GYWPTYIFNP ELLKSGQNPL KITSKEPDWE LYDEFLSNEV
RYNALKKFNP DHASELLEQN KKDSQRRYRQ LVRFSKSDFS DEI
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