Gene CHAB381_1595 details

Gene Information

• Locus tag: CHAB381_1595
• Symbol: murD
• ID: 5408409
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1521076
• End bp: 1522278
• Gene Length: 1203 bp
• Protein Length: 400 aa
• Translation table: 11
• GC content: 34%
• IMG OID: 640871265
• Product: UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
• Protein accession: YP_001407119
• Protein GI: 154148835
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase
• TIGRFAM ID: [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.000263307
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCAAAAT CACTTTTTGG ATACGGATTA ACTACGAAAG CTATCGCAAC TAGCGGCGGC 
TGGGAAATTT TTGATGATAA ATTTAAAGAA TGTAAAAAAG ACGAATTCGG AAATTCGCTT 
TTGCCGATTA ATAAATTTGA TGCGCAAAAA AGCGAACTTG AAATTCCAAG TCCAAGCTTT 
CCACGCAAAC ATCCGCTTAC CATGGCGGCA AAAAATTTAA TCAGTGAATA CGATTATTTT 
TCGCCGAAAA CCAATGCTTT TAAAATTTGG ATAAGCGGCA CAAACGGTAA AACAACAACC 
ACAAAAATGA CGCAATTTTT ATTGAAAAAA TACGGTAGTG ATATGGGCGG AAATGTCGGA 
ATTCCTTTGG CAAATCTTGA TTTAAACGCT AAAATTTGGG TTTTGGAGAC AAGCTCTTTT 
ACACTTCATT ACACAAATTA TGCAGTTCCG GGAATTTACG CGCTTTTGCC GATAACCCCT 
GATCATTTAA GCTGGCATGG AAGCATGACC GAATATGAAA AAACAAAATT AAAACCGCTT 
GCAAAAATGC ACGAAGGAGA TGTTGCAATT TTACCTGAAA AATATGCAAG CACAAAAAGC 
GTGGCGAAAA TTTTAACTTA CAAAAACGAA GAAGATTTAG CGAAATTAAC CGGAATTTCT 
ATAAAAAACG TAAATTTTAA AGTACCTTTT TTAATGGATG CTTTAATGGC GCTTTTGATA 
GAAAAAATTA TGTTTGATAA AGCGGACGTT GATATTTTAA ATAACTTCGT AATTGAAGGA 
AACAAATTGG AAGAATTTTA TGATGCGCGA GGAAGAATTT GGGTAAATGA TACCAAAGCT 
ACAAATATAG ATGCCGCTAT TTGGGCTGTT CGCAGATACA AAGAGAAAAA AATTCACTTA 
ATCTCAGGCG GAGATGACAA AGGTGTAGAT TTACATCCGC TCTTTGAAGA AATTGCAAAA 
TTTAATCCTG AAATTTATGC AATCGGCTCA AATACTGATA AAATCGTAAC TTTATGCGAA 
GAATTTAATC TTAAATGCAC ACGTTGCGAA ATTTTAACAA AAGCGGTAGA TGAAATTTCA 
AAAAATTTAT TAAAAGATGA AGTTGCACTT TTAAGCCCTG CTTGCGCAAG TTTGGATCAA 
TTTTCAAGTT ATGCCGAGCG AGGAAAAATT TTTAAAGAAG CTGTAAATAA AATTTTAAAA 
TAA 

 

Protein sequence

MSKSLFGYGL TTKAIATSGG WEIFDDKFKE CKKDEFGNSL LPINKFDAQK SELEIPSPSF 
PRKHPLTMAA KNLISEYDYF SPKTNAFKIW ISGTNGKTTT TKMTQFLLKK YGSDMGGNVG 
IPLANLDLNA KIWVLETSSF TLHYTNYAVP GIYALLPITP DHLSWHGSMT EYEKTKLKPL 
AKMHEGDVAI LPEKYASTKS VAKILTYKNE EDLAKLTGIS IKNVNFKVPF LMDALMALLI 
EKIMFDKADV DILNNFVIEG NKLEEFYDAR GRIWVNDTKA TNIDAAIWAV RRYKEKKIHL 
ISGGDDKGVD LHPLFEEIAK FNPEIYAIGS NTDKIVTLCE EFNLKCTRCE ILTKAVDEIS 
KNLLKDEVAL LSPACASLDQ FSSYAERGKI FKEAVNKILK