| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1551 |
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| Symbol | topA |
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| ID | 5409448 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 1488719 |
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| End bp | 1490788 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640871221 |
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| Product | DNA topoisomerase I |
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| Protein accession | YP_001407082 |
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| Protein GI | 154148385 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0550] Topoisomerase IA
[COG0551] Zn-finger domain associated with topoisomerase type I |
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| TIGRFAM ID | [TIGR01051] DNA topoisomerase I, bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAATT TAGTAGTAGT AGAATCACCG GCAAAGGCAA AAACAATAGG AAAATTTTTA
GGTGATAATT ATAATGTAAT AGCTTCGAAA GGTCATATAA GGGATTTACC TAAAAAAACT
TTCGGTATAA AAATAAACGA AAAACATTTT GAGCCGGTTT ATGAAATAAG CGAAGATCAC
GCAAAAATAG TTAGTGAAAT AAAAAAATTA GCCAAAAAAG CGGATCAAAT ATATCTTGCA
ACCGATGAAG ACAGGGAAGG TGAAGCTATC GCATATCATA TCGCAACGGC AATCGGCAAA
GAACCTGCAA ACCTGCCTAG AATTGTTTTT CACGAAATTA CAAAAACGGC GATTGAAAAC
GCTATTAAAA ATCCGCGCGC ACTTGATACG GCAAGCGTAA ATGCGCAACA AGCGCGCCGT
CTTTTGGACC GCATTGTAGG CTATAAACTA AGTCCGCTTT TAAGCCAAAA AATTCAAAAA
GGGCTTAGTG CAGGAAGAGT TCAAAGTTCC GCTTTAAAGA TTGTAGTCGA TAGAGAGCGT
GAAATAAATG CTTTTAAGCC TGAAAAATTT TATACTGTAA ATATGATTTT CAAAAAAGAT
TTGGAAGCCG AGTTTGTAAA ATTTAAAAAT AAAAAAATAG AAAAAATGAG TATAAAAACT
GCTAAAGAAG CTGATGAAAT CGTGCAAATT TTATGCGATG AAAAATTTGA AGTTTCAAAG
ATCGAAAGTA AAGACAGAAA AACAAATCCG TATCCTCCTT TTATGACTTC TACATTACAA
CAGAATGCAA GCACTGCACT TGGTTTCAGT CCAAAAAAAA CAATGAATCT TGCGCAAAGT
CTTTATGAAG GCGTCAATGC GCCAAATGGT GGAGCTATCA CATATATGAG AACGGATTCT
TTAAATATCG CAAAAGAGGC GATTGTATCC GTAAGAGATA TGATAAAAAA TGAGTTTGGA
AGTGAATATT TGCCAAAAAG CGCGAATTTT TATGCTACAA AATCAAAAGG CGCTCAAGAA
GCCCACGAAG CAATCCGTCC GACAGATTTA AAATTTACGC CCGCTATTGC GGCAAAATCT
TTACCAAAAG ACGAACTTCG TCTTTATACG CTTATTTACA ACCGCTTTGT GGCATCTCAA
ATGAATCCTT GCGTAAGTGA AATTCAAAAT GTTTTTGCAA AAAGCGGCAG CTCTTTATTT
AAAATTTTAG GCAGAAAAGT AAAATTTGAC GGATTTTATA AAATTTACGG AGAGAATGAT
AAAGATAAAA TTTTACCTGA TTTTAAAATC GGTGATGAGC TGAAAGTTCA AAATTTAAAA
TCCGTAGAAA ACCAAACGGA GCCGCCGGCA AGATATTCGG AGGCAAGTCT TATTAAAAAG
CTTGAGAGTT TAGGAATCGG TCGTCCTTCT ACTTACGCGC CTACACTTTC ACTTCTTATT
TCAAGAAAAT ATGTAAATAC TGAAAAAAAA CAGCTCGTTC CGACAGAGAT TGCTTTTAAA
ATCGTAGAGA TGCTGGAGCA GAATTTTAAT AACATTGTAG ATAGCGAATT TACTTCGAAA
ATGGAAACGA AACTTGATGA AATTGCAGAA AAATCGGCCG ATTGGCAAGA AATTTTAGCT
GATTTTTATT ATCCGTTTAT GGAAAAAATC GCAATCGGTA AAAAAAATAT AAAGAGTCAA
AAAGTAGCCG AACCAATCGG CGAAAAATGC CCTGAATGCG GAGGTGAACT TTTAAAACGA
AACGGCAGAT TCGGCGAGTT TATAGCTTGC AGTAATTTTC CGAAATGCAG ATATTCAAGA
AATCTTTCAG GCGAACAAAA AATTAAAAAA GAACCAGCAA AAATCGGTGT AAAATGTCCT
GAATGCGGAG GCGAAATCGT AGAAAGAGTT TCAAAGCGCG GAAAATTTTA CGGATGTTCT
AATTATCCGA AATGTAATTT CATCTCAAAT TATAAGCCGA CAAATGAAAA ATGTCCGGAG
TGTGGCGAAA TGCTTTTCAA AAAAAGCTTG AAAAAAGGCG ATTTTTTATA TTGCGCAAAG
TGTAAATTTC AAAAGGCGAT AGATGATTAA
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| Protein sequence | MKNLVVVESP AKAKTIGKFL GDNYNVIASK GHIRDLPKKT FGIKINEKHF EPVYEISEDH
AKIVSEIKKL AKKADQIYLA TDEDREGEAI AYHIATAIGK EPANLPRIVF HEITKTAIEN
AIKNPRALDT ASVNAQQARR LLDRIVGYKL SPLLSQKIQK GLSAGRVQSS ALKIVVDRER
EINAFKPEKF YTVNMIFKKD LEAEFVKFKN KKIEKMSIKT AKEADEIVQI LCDEKFEVSK
IESKDRKTNP YPPFMTSTLQ QNASTALGFS PKKTMNLAQS LYEGVNAPNG GAITYMRTDS
LNIAKEAIVS VRDMIKNEFG SEYLPKSANF YATKSKGAQE AHEAIRPTDL KFTPAIAAKS
LPKDELRLYT LIYNRFVASQ MNPCVSEIQN VFAKSGSSLF KILGRKVKFD GFYKIYGEND
KDKILPDFKI GDELKVQNLK SVENQTEPPA RYSEASLIKK LESLGIGRPS TYAPTLSLLI
SRKYVNTEKK QLVPTEIAFK IVEMLEQNFN NIVDSEFTSK METKLDEIAE KSADWQEILA
DFYYPFMEKI AIGKKNIKSQ KVAEPIGEKC PECGGELLKR NGRFGEFIAC SNFPKCRYSR
NLSGEQKIKK EPAKIGVKCP ECGGEIVERV SKRGKFYGCS NYPKCNFISN YKPTNEKCPE
CGEMLFKKSL KKGDFLYCAK CKFQKAIDD
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