Gene CHAB381_1493 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1493 
Symbol 
ID5409641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand+ 
Start bp1431308 
End bp1431967 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content40% 
IMG OID640871164 
Productouter membrane lipoprotein 
Protein accessionYP_001407028 
Protein GI154148551 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1462] Uncharacterized protein involved in formation of curli polymers 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0503324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTTA AAATCTTTTT ATTGGTGCTC ATAACTGCAC TTTTAGGCGG CTGCGCCAGT 
GAAAAATCAC GTGCTGTGCA AACTGAAGCC GTAAAATCGG CACAAATTCC ATATAGCGGC 
GTTAAAATGT CAGTTTCTGT TGGAAGATTC AGTAATCAAT CAAGCTATAA CAACGGCATT 
TTTTCAGACG GCGAAGATCG CCTTGGAAAT CAAGCGCAAA CCATTTTAAT TTCAAACTTG 
CAACAAAGCG GACGTTTTTC CGTAATGGAC CGCACAAATA TGCGTGCTCT TCGTGAAGAA 
GCGACTATTT CTAAAAAAGC GCAAAATTTA AAAGGTGCAA ATTATGTAGT AACAGGTGAT 
ATCGTTGAGT TTGGACGTAA AACTACAGGC GATCATCAAC TTTTTGGAAT TTTAGGACGC 
GGAAAAACTC AAACAGCTTA TTCAAAAGTA ACTCTAAATT TAGTAAATGT CACAACCAGT 
GAAGTTGTAT TTACTGCAAG CGGTGCCGGG GAATACGAAT TATCAAACCG TGAAGTTATC 
GGCTTTGGAG GAACTGCAGG ATACGATTCG ACATTAAACG GCAAAGTGCT TTCTCTTGCC 
ATAAGAGAAG CTGTGGATAA TCTGGCTGTC GGCGTAGAAA ATAGCGGACT TTTGAAATAA
 
Protein sequence
MKFKIFLLVL ITALLGGCAS EKSRAVQTEA VKSAQIPYSG VKMSVSVGRF SNQSSYNNGI 
FSDGEDRLGN QAQTILISNL QQSGRFSVMD RTNMRALREE ATISKKAQNL KGANYVVTGD 
IVEFGRKTTG DHQLFGILGR GKTQTAYSKV TLNLVNVTTS EVVFTASGAG EYELSNREVI 
GFGGTAGYDS TLNGKVLSLA IREAVDNLAV GVENSGLLK