| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1485 |
|---|
| Symbol | |
|---|
| ID | 5408077 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 1424115 |
|---|
| End bp | 1425494 |
|---|
| Gene Length | 1380 bp |
|---|
| Protein Length | 459 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640871156 |
|---|
| Product | periplasmic protein |
|---|
| Protein accession | YP_001407020 |
|---|
| Protein GI | 154148766 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2340] Uncharacterized protein with SCP/PR1 domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAAGC AGGTCCAAAA GCTTAAATTT TGGGCAATTG TCATCGGAAT TTTGTTTGCA
ATTTACGGTT GCAATGAAAT TCCAAATGAC GCCAAAGAAG CAAGCGAGAG CAAAAGCGGT
CTTTCGTTTT ATCAAAATCC TCTTGATTAT TTAAATGATA TACGCACTGA TGTCGGTTTA
AATACGCTTA CTGCTGATTA TACTCTTGAA ATCGCTGCAC AAAATCACGC AAAATACGTT
GTAGCAAATA ATGAAATTTC TCACGACGAA ACAGCAGGAA AAATAAATTT TACCGGTATA
ACTCCACAAG ATAGAGCTTT TGCAGCAGGA TTTAATTCAA GCGTAATTGA AAATTTTTCG
TATAATGCAG AAGATATGAA AATGGCGATT GATAGTCTTA TGAGCGCGAT TTATCATCGT
TTCGGATTTT TAGATTTTCA TATAGACAGC GTTGGAATCG GTTTTGCGGA TGATAATAAA
ATTTCAAGTT ATGTATTCGA AATGGGAAAT TCAAATGTAG AAAATTTTTG TAAAAAAGGT
GTAAACGAAA ACGGTTTTGG CGAGTTTGTA TTCGGATTTT GCAAAGATAA AAAACTTGCA
ATGCAAAAGA AAAATTTTTT ACAGGCGCAA GATTTAAATT TTATCGATTA CGTCGTCTAT
CCAAATAACG AGCCGGCTCT TGCGATTTTT AACGGTGAAA TTCCTGATCC TATGCCTAAA
TGTAAAATTT TATCAACTCC TGTGAGTATA GAATTTAATA AAAATGCGGG TAATATTGAA
ATGCAGGATT TTAAAATTTT TAATCAAAAC GGCGATGAAC TTAAAAATAC TGAAATAATT
GATAAAAACA ACGATATAAA TGGACGATTC AACCAATTTC AATTTGCCGT TTTCAGCAAA
GAAATTTTTG ATTTTGACAG CACTTATAAA GCGCAGTTTG ATTATACGCA AAACGGCGAA
GCGAAAAGAA TAGAGTGGGA ATTTAAAACA CAAACTCCTA AAAATCATTA TTTTGTCGTA
AACGGCGGCG AAAATTTGGC GCTTTTGCCT AATATGACTT ATGATATTTT CGTGCGCCCA
AGTGATTGCA ATGATGTATT TAAAAAATTT AAAATAAGTT ATTCAAATAT GCAAAAACCT
GAAATTTCAG GGCTTTTCGG TAATATTTTG CGTGTAAATT TAAACGGCGC TAAAGGCGCT
AAAGCTGAAA TTTCGCTTGA TAACGGCAAA ACTTTAAAAC TTTTTTTGAA AGAAAAGTCG
CCTAATTATA GTGATAATCG TATAAAATTA GGTATTTTTG CAGGAATTTT AGGTATTATT
TTAGTTTTTA TGATTATAAA AAGGAGAAAA AATGCAAAAA CTATGGGAAG GTCGTTTTAG
|
|---|
| Protein sequence | MQKQVQKLKF WAIVIGILFA IYGCNEIPND AKEASESKSG LSFYQNPLDY LNDIRTDVGL
NTLTADYTLE IAAQNHAKYV VANNEISHDE TAGKINFTGI TPQDRAFAAG FNSSVIENFS
YNAEDMKMAI DSLMSAIYHR FGFLDFHIDS VGIGFADDNK ISSYVFEMGN SNVENFCKKG
VNENGFGEFV FGFCKDKKLA MQKKNFLQAQ DLNFIDYVVY PNNEPALAIF NGEIPDPMPK
CKILSTPVSI EFNKNAGNIE MQDFKIFNQN GDELKNTEII DKNNDINGRF NQFQFAVFSK
EIFDFDSTYK AQFDYTQNGE AKRIEWEFKT QTPKNHYFVV NGGENLALLP NMTYDIFVRP
SDCNDVFKKF KISYSNMQKP EISGLFGNIL RVNLNGAKGA KAEISLDNGK TLKLFLKEKS
PNYSDNRIKL GIFAGILGII LVFMIIKRRK NAKTMGRSF
|
|---|
| |