Gene CHAB381_1441 details

Gene Information

• Locus tag: CHAB381_1441
• ID: 5408834
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1378248
• End bp: 1384985
• Gene Length: 6738 bp
• Protein Length: 2245 aa
• Translation table: 11
• GC content: 31%
• IMG OID: 640871114
• Product: Ig family protein
• Protein accession: YP_001406981
• Protein GI: 154148762
• COG category: [Q] Secondary metabolites biosynthesis, transport and catabolism
• COG ID: [COG2931] RTX toxins and related Ca2+-binding proteins

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.195412
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGATAAATG GTAAAGGTGG AGATGATAAA CTCTATGGAG CTGGTGGTGA TGATTTATAT 
GAGTTTGATA AAAATTTTGG AAATGATATC ATATACGATA CTCAAGGAAA TAATGAAATA 
GTATTTACAA AAGGTATTAC AAAAGAAGAT CTCTCATTTA AAAGAGAGCT TGCAAATTTA 
ATAATCTATG TCACAAATGA AAATGGCGAA AAAGACAGCA TAACTGTGCA AAACGCTTTT 
TGTTTGATTA ATGACTTAGG TGATGGAATT ATACAAAGTA TTACTTTTGC AGACGGAACA 
AAGTTAAGCA AAGACGATAT ATTAAATTTA TCACCTTTAA AAGGAAGTGA TGAAGCAGAT 
AATTTATATT TAACTAATGA AAATGATATA TTAAACGCCG GAAATGGAAA TGACGAAATA 
CACGGCAAAA AAGGTGATGA TATTATAAAT GGAGATAGCG GTGATGATAG GTTATTTGGC 
GGAATTGGTA ATGACATATT AAACGGTGGG ACTGGAAATG ATGAGTTATA TGGTGAAGAT 
GGAAATGATA CATATGTCTT TTCTAAAAAC TGGGGAAAAG ATACCATTGT AGATAATCAA 
GGCTTAAACA GTATAGAATT TATTGACGGT ATCAATGTGA ATGATTTAGT CTTTGATAAA 
AACGGTAATG ACCTAGTGAT ATCAGATAAA GAGCTTAAAA ACACAATTAC TATAAAAAAT 
ATAGTAAATG AAAATGGAAC TTTAAATAAT TCCATATCAA AAATTATATT TAATAGAAAA 
ATTATTAACG GTAAAGAAAG CTTTGATTTT ATTACTACAA ATGAAATACT TGATTATATG 
ATTAGGCCTA GTGATGAATC GGATGAACTT ATAGGTTATA ACGATCACTC TTACACTATA 
AACGCTCTTG ATGGAAATGA TACGATAATA ACAAATATCA AAGATGATAT TTTAATAGGT 
GGTAAAGGAG ATGATACCCT AATAGGAAAA GCTGGAAATG ACATCTATAT CTTTGGTAAA 
GACTTTGGAA ATGATACTAT CATAGAAGAA AATAATGATA AAAATGTCAT TAAATTTACA 
GATGGCATTT CAAAAGATGA TCTTTTATTT AAAAAACTAA ATAATGATTT AGTGATACTT 
CAAAATAAGA ATTCTGTAAT CATAAAAGAT ATGTTTAATG GTGCTTCTAT AAATAGCAAA 
ATAGACAAAA TAGTGTTTGA TGATGGAAGC AGTATCACAA ATAGAGAATT TATAAACTTG 
GCAGTAGCAA ATTCATCTAG CAATGAAAAT GATACACTTA TTGGATATTT CGATGATGAT 
TATGTATTAG ATGCGCTAGA TGGAAATGAT ACTATTATCA CAAATGGTGG AAATGACGTT 
TTAATAGGTG GAGCTGGAGA TGACACCTTA AAAGGTGGCA AAGGAAATGA CACATATAAA 
TTTGAGTTAA ATCACGGTAA AGATATCATT GAAGATAATA TCGGCAAAGA AACCATAGTT 
ATAAACGGCA GAACAAAAGA AGATCTTATC TTTACATATG ACGCTACTAC AACGGACTTA 
ATTATTAACT ATAAAGATAA TAAAAACGAT AGTATAACCA TAAAAAAATG GAAATATATG 
GATAATCTTA CTATTAAATT TGATGATAAC TCATATATAG ATGATAGATA TATAACAAAC 
AAAATAAAAA CTATAAACTC AGATTCCGAT ACTTCCGAAG TTGGTATATA TTATAATACA 
AATCTTGAAG ATGGAGATGA TGTTTATATA ATAAAAAAAG ATGCAGGAAA ACTATCTATA 
TATGATAATT TTACTCTTCA CTCTTATAAA GTAGATGGTG GAAACGATAC AATTAAATTT 
GATGAAATTT CATCAAATGA AGTCGTTTAT AAAATGTCAG GCAGCAATCT TTTAATCGGC 
ATAGCAGAAG AAAATAAAAA ATTTGAAGAC TTAAATACCG TAGTAACTAT CAAAAACTGG 
ACCTCTAAAC ATAATAGAAT TGAAAATTTT GCATTTAGTG ATAAAACACT TTCTCAAAAC 
GACATTATAA ATAAATTTTC AAAATCTGAA AATTTATTAT TTCAAACCGA TGAAAGCGAT 
AAAGCTACAT TTAAAAACGG TGGAGTTATA TACGCACTTG ATGGAGATGA TGAGATAGTA 
TCCGTAGAAA ATAAAAGCGA AGTTTACGGC AATGATGGTA ATGATAAAAT AATCGCAAAC 
GGCACTATTT ACGGCAATGA AGGAGATGAT ACTCTAAAAG GCTATAGTGG CGATGATACT 
ATTTATGGTG GCGAGGGAGA TGATATCTTA ATTGGTGCAA GTGGGGATGA TTTTCTTCAA 
GGAGATAGTG GAGATGATAC ATATGTCTTT GGCAAAGAGT GGGGAAACGA TACTATAAAT 
AACTTTGATA GAAACGGCAC GGATAAAATA AAATTTACAG ACGGCATTTC AAAATATGAT 
TTGATATTTG CAAGAGGCGT TAAAAATAGT GATGTTACAA ATGATCTTTT CATCTATTCA 
AAAGACAAGA AAAACTCAAT TAAAATTACG GATTTCTTTT ATAGTTATCA ATCAATAGAT 
GAAAACAGAA AAATTGATTT AATTGAATTT GATAACGGCG AAATTTTAAA ATCCGAAGAT 
TTGAAATATT TGGTATTGCA AGGTTCTAAA TATGATGATG TTATAAGAGG ATATGACGAA 
GACTTTACAT TTGACGCAGG AGAAGGTAGT GACATCGTAT TTGCAGGAAA CAAAAACGAT 
AAAATTTTTG GCAACGACGG TGACGATACT TTATATGGCG AAGACGGAAA TGATACTTTA 
ATAGGTGGCA CAGGAAATGA CACTTTACAA GGTGGAGACG GAGATGATAC ATATATATTT 
AATCTCGGTG ATGGTAAAGA TGAAATTTAT GAAAGTAGCG GAAATGACAT TATAGAGTTT 
GGAGATGGAA TTTCAAAAGA TAGCCTTATA GTTATAAGAG ATGGTGAAAA TAATCTTAAA 
ATTTATGTAA AAGATAATCC AAACATTTCA AATAAAGATA TAAATTTAGA TGATATCAAA 
GACACTATAA CTTTAAAAAA TGTATTTAGC AACAATTCAT CAAAACATGA AAATTTAATC 
GAAACAATCA AATTTCAAGA CGGCTCAACT TTAAATTTCA ATGATATTAA AAAACTTTCA 
CTAATAAACA GTTCAAATAG CACGGAAACT TTGAGAGGTT ATGACGATGA AAATAACAAT 
ATCGTTGGAA ATGACGCGGA TGAAACTATA TACGGTGGAG AACTCGATGA CACGATAAAC 
GCAGGAGCCG GAAACGATAC TATAACCGCA TATTCCGGCA AAAATACATT GATCGGCGGC 
AGCGGCGATG ATGTGTTTTA CGGCGATCAG GCAAACAACA CATATATTTT TAGTAAAGGC 
GACGGTAATG ATAAGATTAG CGGACGAAGC AGCGACAGCA CGATAAAATT TGAGGACGGC 
ATTTCAAAAG ACGACATAAA AGTTACAAGA GGTGAAAATC TGGATGATTT AGTCGTAAAG 
ATTAATGAAA ACGACAGTAT AACTATAAAA AATTTCTATT ATGATGGAAA TATAAATAAA 
GAAAACGAAA AAGCGATCGT AAGTAATTTT TTATTTGCTA ACGGCGAAAA GATTGGTTAT 
GAAGAATTTC ATAAGTTATC TTATATCGGC AAAGAGAGTG ACGATACTAT ATACGGCTTA 
AATTCCAACG ATACTATAAA AGGCAACGAC GGTGACGATA CTTTATATGG CGAAGACGGA 
AACGATACTT TAATAGGTGG CACAGGAAAC GATAAACTTA TAGGCGGAAA AGGAGACGAT 
ATTTATATCT TTAATCTCGG TGACGGAAAA GATGAAATTT ATGAAGAAAG CGGAAACGAC 
ACTATAGAGT TTGGAAAAGG AATTTCAAAA GATAGCCTTA TAGTTATAAG AGATGGTGAA 
AATAATCTTA AAATTTATGT AAAAGATAAT CCAAACATTT CAAATAAAGA TATAAATTTA 
GATGATATCA AAGACACTAT AACTTTAAAA AATGTATTTA GCAACAATTC ATCAAAACAT 
GAAAATTTAA TCGAAACAAT CAAATTTCAA GACGGCTCAA CTTTAAATTT CAATGATATT 
AAAAAACTTT CACTAATAAA CAGTTCAAAT AGCACGGAAA CTTTGAGAGG TTATGACGAT 
GAAAATAACA ATATCGTTGG AAATGACGCG GATGAAACTA TATACGGTGG AGAACTCGAT 
GACACGATAA ACGCAGGAGC CGGAAACGAT ACTATCAAAG ATCTAAACGG AAATAATACG 
ATTTATGCAG GAATCGGCGA TGATACAATC AATGCAAACG GAACAATTTA CGCAGGAATC 
GGCGATGATA CAATCAATGC AAACGGAACA ATTTACGCAG GAAGCGGAAA CGATACAATC 
AACGCAAGCG GAACAATATA TGCAGAAGAC GGGAATGATA ATATAAATGC TACAGGATTT 
ATAGACGCAG GAAACGGAAA CGATATAGTG ACAGCAAGCG ACGTATATTC CAGCGAAGAA 
TTTAATACTA TAATCGGTGG AAAAGGCGAT GACGAATTGC ACGGAAGCTA TAGTAATGAA 
AAATATATAT TCAGTAAAGG CGACGGGAAA GATGAAATTT ATGAAAATGG CGGAAACGAT 
ACTATAGAAT TTAAAAATAA CCTCTTAAAA GAAAATCTGA TAGTAAAACG AAACGGCGAA 
AACGATATAA CAATTAAATT TAAAGACGAT CAAACGGATT TGATAACTTT AAAAAACGTT 
GTTTATGGTA ATATCATTTC AAACCAAAAC ACGATAGAAA ATTTTACATT TGCAAACGGC 
GAAACGCTGA CATTTAATGA CATAAAAAAA GCCTCAATGA TTGGCTTTGA TGAAGATGAC 
ACTATAAAAG GCTATGATGA CGCGGACAAT TTTATAAGCA CATCGGCAGG CGATGACAAA 
ATCATAGGCG GTATATTTAA TGACACTATA ATCGGTGGAA GTGGAAATGA TAAACTTCAA 
GGTGGAGATG GAGATGATAC ATATATCTTT AATCTTGGTG ATGGCAAAGA TATCATCACA 
GAGCGTGAAC TTAGCGAACC ATATTTGATA AGACAAGATT CATTTGATAC CGTAAAATTT 
ACAAAAGGAG TGAATAAAGA CGATATCTTG CTATCAAGAA ATGGCGACGA TTTGATTATC 
AAAAATAAAA CAAATGGTGA CGAAATCACA GTTAAAAATC ATTTCTTTTT ATCAAACAGA 
TATTATAAAA TAAACTCAAT TGAATTTGAT GATGGAACAA TTTGGGATGA AAAGTATATA 
GATCACAATG CTGTTTATTA TGGTAGTGAC GCAAATGACG AACTTTCAGG ATATATGGGA 
AATGATGACA TAATTAAAGC AGATAGTGGA AATGACACTA TATATGGATT TGACGGAGAT 
GATGAAATTT ACGGTGAAGA TGGTGATGAT TATTTAAGTG GTGGAAATGG AATAGAAAAA 
AACACAGGAA ACGATAAGCT ATATGGAGGA GCCGGAAACG ATCAACTTAG AGGTGAAGAT 
GGAAATGATT ATCTAAACGG CGGAAGCGGC GATGATAGAT ATTATTATTC TTATGGAGAT 
GGGTTTGACA CTATAGAAAA TGAAGGCGGT GGAAGTGATT CTTTGATATT TTTTGATATT 
ACAAGAGATA GATTAAGCTT TTCAAAAGAA GAAAACGACC TTATCATAAA TATAGACAAC 
GATGCAAATC AAGGAGTAAG AGTTAAAAAC TACTTTTTAA ATGATGAGTA TGCTCTTGAT 
ATGATCCAAC CAGGAGATCA AAAGCCTGCT TATACTAAAA ACGATATAGA CAATATCGTA 
AATGCCTTTG ATAAGCCAAC TCTTACAGAA GATAAAAATG CAAATATTAT TGATACTAAA 
AACGATGAAA TTTTACAAGG AAGCGACAAA AACAACACTT ATTATTATCA TGGAGGAAAA 
GATCTTATAG TTGATAGTGG TGGAATTGAT ACTTTGAAAT TTATGATTAA TGGATATCAT 
CTTAATTTTT CATCAAACGG AACTGATTTG TCATTAAGCC TTGGTAATAT ACAAGATAAA 
AATAACAATA ATATTGTAAC CATAAAAGAC TTTTTTGCAA ATGAAAATTC AATTGTAGAA 
ACAATACAAC TTAAAAACGG TTATAAATTC AGTGCAAAAG ATATTTATCA AAGCTTTGGA 
AAAGAGTATC CAAAAAATGA CTCTTCAAAT ACTACAGATC CTCAACCAAA CGAAAATAAT 
TTAGTTGGTG GCAATGAAGA TAACAGATAT GTATTTAGCG GAGGTCAAAA AACAGTAATA 
GATAGTGGTG GAAACGATAC TATAAAATTT ACGCAAGATG GAAATGGTTT AAATTTTTCA 
ACAAACGGAA CGGATTTAAC TTTAAATGTT TACAATCATG AAAACGATAC TATAACAGTT 
AAAAATTTCT TTACAAATCC AAGCAATATA ATTGAAAAGT TTGAACTTAA AAACGGTTAC 
ACAATTACTT CAGAGCAAAT TTATCAAAGC TTTGGAAAAG AGTATCCAAA CAGCAATGAA 
CCTTTTGGAG TATCAGCAGA CACTGCGAAT AAAATCATTG AAGAACTAAA CTCATATTCA 
AACGATAATG CGCTAAATTT AAATTTCAAA AACGAAACAA ATAAAAATAT GGATATAATG 
CAAATCTATA ATGTATGA 

 

Protein sequence

MINGKGGDDK LYGAGGDDLY EFDKNFGNDI IYDTQGNNEI VFTKGITKED LSFKRELANL 
IIYVTNENGE KDSITVQNAF CLINDLGDGI IQSITFADGT KLSKDDILNL SPLKGSDEAD 
NLYLTNENDI LNAGNGNDEI HGKKGDDIIN GDSGDDRLFG GIGNDILNGG TGNDELYGED 
GNDTYVFSKN WGKDTIVDNQ GLNSIEFIDG INVNDLVFDK NGNDLVISDK ELKNTITIKN 
IVNENGTLNN SISKIIFNRK IINGKESFDF ITTNEILDYM IRPSDESDEL IGYNDHSYTI 
NALDGNDTII TNIKDDILIG GKGDDTLIGK AGNDIYIFGK DFGNDTIIEE NNDKNVIKFT 
DGISKDDLLF KKLNNDLVIL QNKNSVIIKD MFNGASINSK IDKIVFDDGS SITNREFINL 
AVANSSSNEN DTLIGYFDDD YVLDALDGND TIITNGGNDV LIGGAGDDTL KGGKGNDTYK 
FELNHGKDII EDNIGKETIV INGRTKEDLI FTYDATTTDL IINYKDNKND SITIKKWKYM 
DNLTIKFDDN SYIDDRYITN KIKTINSDSD TSEVGIYYNT NLEDGDDVYI IKKDAGKLSI 
YDNFTLHSYK VDGGNDTIKF DEISSNEVVY KMSGSNLLIG IAEENKKFED LNTVVTIKNW 
TSKHNRIENF AFSDKTLSQN DIINKFSKSE NLLFQTDESD KATFKNGGVI YALDGDDEIV 
SVENKSEVYG NDGNDKIIAN GTIYGNEGDD TLKGYSGDDT IYGGEGDDIL IGASGDDFLQ 
GDSGDDTYVF GKEWGNDTIN NFDRNGTDKI KFTDGISKYD LIFARGVKNS DVTNDLFIYS 
KDKKNSIKIT DFFYSYQSID ENRKIDLIEF DNGEILKSED LKYLVLQGSK YDDVIRGYDE 
DFTFDAGEGS DIVFAGNKND KIFGNDGDDT LYGEDGNDTL IGGTGNDTLQ GGDGDDTYIF 
NLGDGKDEIY ESSGNDIIEF GDGISKDSLI VIRDGENNLK IYVKDNPNIS NKDINLDDIK 
DTITLKNVFS NNSSKHENLI ETIKFQDGST LNFNDIKKLS LINSSNSTET LRGYDDENNN 
IVGNDADETI YGGELDDTIN AGAGNDTITA YSGKNTLIGG SGDDVFYGDQ ANNTYIFSKG 
DGNDKISGRS SDSTIKFEDG ISKDDIKVTR GENLDDLVVK INENDSITIK NFYYDGNINK 
ENEKAIVSNF LFANGEKIGY EEFHKLSYIG KESDDTIYGL NSNDTIKGND GDDTLYGEDG 
NDTLIGGTGN DKLIGGKGDD IYIFNLGDGK DEIYEESGND TIEFGKGISK DSLIVIRDGE 
NNLKIYVKDN PNISNKDINL DDIKDTITLK NVFSNNSSKH ENLIETIKFQ DGSTLNFNDI 
KKLSLINSSN STETLRGYDD ENNNIVGNDA DETIYGGELD DTINAGAGND TIKDLNGNNT 
IYAGIGDDTI NANGTIYAGI GDDTINANGT IYAGSGNDTI NASGTIYAED GNDNINATGF 
IDAGNGNDIV TASDVYSSEE FNTIIGGKGD DELHGSYSNE KYIFSKGDGK DEIYENGGND 
TIEFKNNLLK ENLIVKRNGE NDITIKFKDD QTDLITLKNV VYGNIISNQN TIENFTFANG 
ETLTFNDIKK ASMIGFDEDD TIKGYDDADN FISTSAGDDK IIGGIFNDTI IGGSGNDKLQ 
GGDGDDTYIF NLGDGKDIIT ERELSEPYLI RQDSFDTVKF TKGVNKDDIL LSRNGDDLII 
KNKTNGDEIT VKNHFFLSNR YYKINSIEFD DGTIWDEKYI DHNAVYYGSD ANDELSGYMG 
NDDIIKADSG NDTIYGFDGD DEIYGEDGDD YLSGGNGIEK NTGNDKLYGG AGNDQLRGED 
GNDYLNGGSG DDRYYYSYGD GFDTIENEGG GSDSLIFFDI TRDRLSFSKE ENDLIINIDN 
DANQGVRVKN YFLNDEYALD MIQPGDQKPA YTKNDIDNIV NAFDKPTLTE DKNANIIDTK 
NDEILQGSDK NNTYYYHGGK DLIVDSGGID TLKFMINGYH LNFSSNGTDL SLSLGNIQDK 
NNNNIVTIKD FFANENSIVE TIQLKNGYKF SAKDIYQSFG KEYPKNDSSN TTDPQPNENN 
LVGGNEDNRY VFSGGQKTVI DSGGNDTIKF TQDGNGLNFS TNGTDLTLNV YNHENDTITV 
KNFFTNPSNI IEKFELKNGY TITSEQIYQS FGKEYPNSNE PFGVSADTAN KIIEELNSYS 
NDNALNLNFK NETNKNMDIM QIYNV