Gene CHAB381_1400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1400 
Symbol 
ID5408687 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1334692 
End bp1340442 
Gene Length5751 bp 
Protein Length1916 aa 
Translation table11 
GC content32% 
IMG OID640871077 
Productputative adhesin 
Protein accessionYP_001406949 
Protein GI154149446 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[W] Extracellular structures 
COG ID[COG5295] Autotransporter adhesin 
TIGRFAM ID[TIGR03157] CRISPR-associated protein Csc2 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCTAAAGA TACTTCAGCA ACTAGGAGAC ATAACTTATA AAGTTAATGT TAAATTAGAT 
GAATATGCTA AATCAACTGA CATAGATACA AAACTTGGTG ATTATGTAAA ATCAGTAACA
GGTGATGACT TTATCAAAGT AGACGCAACC AAAAAACAAA GCCCAGCTTT ATCTCTTGAT
ACAGATAAGC TTGCAAACGA TAGCACATTT GTAACAAACA TTGCAGGAAA TAAGGTATTT
AAAAATACAT ATGTAACAAA TGAAAATTTG GAAAAAGGCT ATACAAAACT TGATGGAACA
AATCTATTTA AAGATAATAC TTTAAATGAA TTAAATCCAA ATTTCAAAAA AGACAATTGG
AGAAAAGCTC TTGATATAAG TGACGCTAAT ATTCAAAAGC TAGCTCAAAA ATCTGTTGTA
GTAGCAAATG GAGAAAACAC AACAGTTGCT AAAGATACTT CAGCAACAGG AGACATAACT
TATAAAGTTA ATGTTAAATT AGATGAATAT GCTAAATCAA CTGACATAGA TACAAAACTT
GGTGATTATG TAAAATCAGT AACAGGTGAT GACTTTATCA AAGTAGACGC AACCAAAAAA
CAAAGCCCAG CTTTATCTCT TGATACAGAT AAGCTTGCAA ACGATAGCAC ATTTGTAACA
AACATTGCAG GAAATAAGGT ATTTAAAAAT ACATATGTAA CAAATGAAAA TTTGGAAAAA
GGCTATACAA AACTTGATGG AACAAATCTA TTTAAAGATA ATACTTTAAA TGAATTAAAT
CCAAATTTCA AAAAAGACAA TTGGAGAAAA GCTCTTGATA TAAGTGACGC TAATATTCAA
AAGCTAGCTC AAAAATCTGT TGTAGTAGCA AATGGAGAAA ACACAACAGT TGCTAAAGAT
ACTTCAGCAA CAGGAGACAT AACTTATAAA GTTAATGTTA AATTAGATGA ATATGCTAAA
TCAACTGACA TAGATACAAA ACTTGGTGAT TATGTAAAAT CAGTAACAGG TGATGACTTT
ATCAAAGTAG ACGCAACCAA AAAACAAAGC CCAGCTTTAT CTCTTGATAC AGATAAGCTT
GCAAACGATA GCACATTTGT AACAAACATT GCAGGAAATA AGGTATTTAA AAATACATAT
GTAACAAATG AAAATTTGGA AAAAGGCTAT ACAAAACTTG ATGGAACAAA TCTATTTAAA
GATAATACTT TAAATGAATT AAATCCAAAT TTCAAAAAAG ACAATTGGAG AAAAGCTCTT
GATATAAGTG ACGCTAATAT TCAAAAGCTA GCTCAAAAAT CTGTTGTAGT AGCAAATGGA
GAAAACACAA CAGTTGCTAA AGATACTTCA GCAACAGGAG ACATAACTTA TAAAGTTAAT
GTTAAATTAG ATGAATATGC TAAATCAACT GACATAGATA CAAAACTTGG TGATTATGTA
AAATCAGTAA CAGGTGATGA CTTTATCAAA GTAGACGCAA CCAAAAAACA AAGCCCAGCT
TTATCTCTTG ATACAGATAA GCTTGCAAAC GATAGCACAT TTGTAACAAA CATTGCAGGA
AATAAGGTAT TTAAAAATAC ATATGTAACA AATGAAAATT TGGAAAAAGG CTATACAAAA
CTTGATGGAA CAAATCTATT TAAAGATAAT ACTTTAAATG AATTAAATCC AAATTTCAAA
AAAGACAATT GGAGAAAAGC TCTTGATATA AGTGACGCTA ATATTCAAAA GCTAGCTCAA
AAATCTGTTG TAGTAGCAAA TGGAGAAAAC ACAACAGTTG CTAAAGATAC TTCAGCAACA
GGAGACATAA CTTATAAAGT TAATGTTAAA TTAGATGAAT ATGCTAAATC AACTGACATA
GATACAAAAC TTGGTGATTA TGTAAAATCA GTAACAGGTG ATGACTTTAT CAAAGTAGAC
GCAACCAAAA AACAAAGCCC AGCTTTATCT CTTGATACAG ATAAGCTTGC AAACGATAGC
ACATTTGTAA CAAACATTGC AGGAAATAAG GTATTTAAAA ATACATATGT AACAAATGAA
AATTTGGAAA AAGGCTATAC AAAACTTGAT GGAACAAATC TATTTAAAGA TAATACTTTA
AATGAATTAA ATCCAAATTT CAAAAAAGAC AATTGGAGAA AAGCTCTTGA TATAAGTGAC
GCTAATATTC AAAAGCTAGC TCAAAAATCT GTTGTAGTAG CAAATGGAGA AAACACAACA
GTTGCTAAAG ATACTTCAGC AACAGGAGAC ATAACTTATA AAGTTAATGT TAAATTAGAT
GAATATGCTA AATCAACTGA CATAGATACA AAACTTGGTG ATTATGTAAA ATCAGTAACA
GGTGATGACT TTATCAAAGT AGACGCAACC AAAAAACAAA GCCCAGCTTT ATCTCTTGAT
ACAGATAAGC TTGCAAACGA TAGCACATTT GTAACAAACA TTGCAGGAAA TAAGGTATTT
AAAAATACAT ATGTAACAAA TGAAAATTTG GAAAAAGGCT ATACAAAACT TGATGGAACA
AATCTATTTA AAGATAATAC TTTAAATGAA TTAAATCCAA ATTTCAAAAA AGACAATTGG
AGAAAAGCTC TTGATATAAG TGACGCTAAT ATTCAAAAGC TAGCTCAAAA ATCTGTTGTA
GTAGCAAATG GAGAAAACAC AACAGTTGCT AAAGATACTT CAGCAACAGG AGACATAACT
TATAAAGTTA ATGTTAAATT AGATGAATAT GCTAAATCAA CTGACATAGA TACAAAACTT
GGTGATTATG TAAAATCAGT AACAGGTGAT GACTTTATCA AAGTAGACGC AACCAAAAAA
CAAAGCCCAG CTTTATCTCT TGATACAGAT AAGCTTGCAA ACGATAGCAC ATTTGTAACA
AACATTGCAG GAAATAAGGT ATTTAAAAAT ACATATGTAA CAAATGAAAA TTTGGAAAAA
GGCTATACAA AACTTGATGG AACAAATCTA TTTAAAGATA ATACTTTAAA TGAATTAAAT
CCAAATTTCA AAAAAGACAA TTGGAGAAAA GCTCTTGATA TAAGTGACGC TAATATTCAA
AAGCTAGCTC AAAAATCTGT TGTAGTAGCA AATGGAGAAA ACACAACAGT TGCTAAAGAT
ACTTCAGCAA CAGGAGACAT AACTTATAAA GTTAATGTTA AATTAGATGA ATATGCTAAA
TCAACTGACA TAGATACAAA ACTTGGTGAT TATGTAAAAT CAGTAACAGG TGATGACTTT
ATCAAAGTAG ACGCAACCAA AAAACAAAGC CCAGCTTTAT CTCTTGATAC AGATAAGCTT
GCAAACGATA GCACATTTGT AACAAACATT GCAGGAAATA AGGTATTTAA AAATACATAT
GTAACAAATG ATAAATTATC AGACTCAGGC TTTAAATTTA CAGGTGATGA TACTGCCAAA
GAAATTGATA AAAAATTAGG TGGAACCATT TCTATCAAAG GTGGTGCGGA TTCTACAAAA
CTTTCTGATA AAAATATCGG TGTAGTGGCA GTAAATGATA GTTTGCAAGT AAAACTTGCT
AAGAATTTGC TTGGATTAGA AAGCGCCGAA TTCAAAAAAG GTGCAGACAC AACTACTGTT
AGTGCTGAAA AAGGTATATC TACAACCAAA ACATTAAAAG TTACAGATGG TAGTGGAAAT
ACGGTAGCAG AAATTGACAA AACCCAAATC ACAGATGCAA GCGGCAATAA AGTAACCAAT
ATCAATAGCG CTATAAATAA TCTTTATGCT ACTACTAAAG GTTTGACAAG TGATAATGCA
TTGGCTGTAA AATATGATTC ATCTACTAAA GAAAAAATTA TGCTTGGTGG AAGTGGTGCT
ACAAAACAAG TTGCCATTAA AAATCTTGCT AGTGCGGGAG ATATTAATGA CGTTAACAAC
AAATTCAATG CTGTAAATGC TGGTGATTTA AAAACTGCTT TAAGTGGAGT AAATAACTCT
ATAGACAACA TAAATAACAG AAACTTTATA AGTTTAAGTG TATCTGCAAA TGGTGGCACA
AAAGATGATA TAAAAGCAAA GGAAAATATT GATTTTACCG CTACAGACGG TATAACAGTA
GCTTACAACG CAAGTGTGAA CAAATTTACA TTCAGTGCTG ATTTTGATTC AATTGCAAAT
AATAATGTTT TATCAAACAA ATATGCAATG CTTGACGGAA GCAATTTGAT AGCCACTAAA
GGCTTCAAAC AAGATGCTTG GCGAGGAGCT TTAGGTCTAA CAGATGCTAA CATAGCAAAT
ATATTTGAGG AAGGAAAAGA TATCTCTATA ACAAAAAATA GCAATAATAA TAAATACACT
ATCGCTTATA CAGGCACAGG CGGCGGTACA GGCACAGGTG GAATGTCTGA AGCTGAAGTT
AAAGAAATTA TCAATAATTA TATCGGTGGC AATATTATAA ATCCTGCTAA ATTTAATGAG
AAACTTATAA CTCACGATGT AAGCGAACGA AAAACAACAG AGAACAAAAG CATAATTGCC
GCAATAAATA GAATAAATAA ATATGGAATC GGTTTTGTGC ATGTAAATGG TGGTGATATT
ACTCCAGATC CAACAACCGG TAAATCAGCA AATGATTCGT CTGCAGAAGG TACAAATGCA
ATTGCCATCG GTCCAAAATC ACAAGCAAAC AGAGATAATT CAATCGCTAT CGGACTAAAA
TCACAAGCAA ACGGTGAAAA TTCGATTGCT ATCGGCGTAG GTAATGTTGT AACCGGTAAA
AATTCAGGTG CATTCGGCGA TCCGACATAT ATAAATGGGG ATAATTCATA CGCAATCGGA
AATAATAATA AAATTGATTC TGAAAATACA TTTGTATTAG GAAATGAAGT TAGAGTCGGT
GCAGATATGC AAGGCGCTGT AGTATTGGGA AGTGGTTCAA CGGCGGTGGA CAAAGCTATA
GAAGTATCAA GAGCTGAAGT AAATGGTATA ACTTATGATG GATTTAAAGG ACAAGCAGCC
GGCGGAATGA TACTTTCTGT AGGTGCTAAG GGCGCCGAGC GACAAATCAA AAATGTTGCG
GCAGGTAAAA TTTTAAAGGA CAGCACAGAT GCCGTAAACG GAAGCCAACT ATACGCTACA
AATAAAATTA TAGGAAATGT AGCAAATAGT GTAAAAAATG TAATCGGCGG CAATGCTAAG
GTAAATAACA ACGGTGAAAT TTCAGCTTCA GATATAGGCG GAACCGGTCA AAACAATATA
AATAACGCTA TAGCTTATAT AAACAAGAGA AATAAAAGCG GAAATTCATA TATTGATATT
GACGCACCTG AAGGAAGTGT ATTGCCAAGT GTAAGCAAAG GTTCAAATTC AATAGCAATC
GGTGCAGGAT CAAGTGATGA CAAACGTAAA AATGTAGTAT CTGTCGGTAA TGCAACAAAA
GGTCTAAATA GAACCATCAC AAATGTAGCA CCAGGTAAAT ACGGCACTGA TGCTGTAAAT
ATGAATCAAC TTTACGGCGT TGCCGGTGGA TTGTCAAAAC AAATCAATGA CGTAAAAAAG
AAATCGAGTG CAGGTATCGC AGGAGCTGTG GCTCTTGGTA TGCTACCGCA ATCAAATATT
CCTGGAGATG CGCTTGTATC AATCGGTACA GGATATCATG ACAGTGAAAG TGCAGTCGCA
CTTGGTATCA GCAAAACAAG TGACAACGCA AGATGGATTT TTAAAGGTGG CGTAAGCTAT
GACAGTCAAG ATGAAGTAAC AGCCGGTGCA TCGGTAGGTT TTCACTTCTA A
 
Protein sequence
MLKILQQLGD ITYKVNVKLD EYAKSTDIDT KLGDYVKSVT GDDFIKVDAT KKQSPALSLD 
TDKLANDSTF VTNIAGNKVF KNTYVTNENL EKGYTKLDGT NLFKDNTLNE LNPNFKKDNW
RKALDISDAN IQKLAQKSVV VANGENTTVA KDTSATGDIT YKVNVKLDEY AKSTDIDTKL
GDYVKSVTGD DFIKVDATKK QSPALSLDTD KLANDSTFVT NIAGNKVFKN TYVTNENLEK
GYTKLDGTNL FKDNTLNELN PNFKKDNWRK ALDISDANIQ KLAQKSVVVA NGENTTVAKD
TSATGDITYK VNVKLDEYAK STDIDTKLGD YVKSVTGDDF IKVDATKKQS PALSLDTDKL
ANDSTFVTNI AGNKVFKNTY VTNENLEKGY TKLDGTNLFK DNTLNELNPN FKKDNWRKAL
DISDANIQKL AQKSVVVANG ENTTVAKDTS ATGDITYKVN VKLDEYAKST DIDTKLGDYV
KSVTGDDFIK VDATKKQSPA LSLDTDKLAN DSTFVTNIAG NKVFKNTYVT NENLEKGYTK
LDGTNLFKDN TLNELNPNFK KDNWRKALDI SDANIQKLAQ KSVVVANGEN TTVAKDTSAT
GDITYKVNVK LDEYAKSTDI DTKLGDYVKS VTGDDFIKVD ATKKQSPALS LDTDKLANDS
TFVTNIAGNK VFKNTYVTNE NLEKGYTKLD GTNLFKDNTL NELNPNFKKD NWRKALDISD
ANIQKLAQKS VVVANGENTT VAKDTSATGD ITYKVNVKLD EYAKSTDIDT KLGDYVKSVT
GDDFIKVDAT KKQSPALSLD TDKLANDSTF VTNIAGNKVF KNTYVTNENL EKGYTKLDGT
NLFKDNTLNE LNPNFKKDNW RKALDISDAN IQKLAQKSVV VANGENTTVA KDTSATGDIT
YKVNVKLDEY AKSTDIDTKL GDYVKSVTGD DFIKVDATKK QSPALSLDTD KLANDSTFVT
NIAGNKVFKN TYVTNENLEK GYTKLDGTNL FKDNTLNELN PNFKKDNWRK ALDISDANIQ
KLAQKSVVVA NGENTTVAKD TSATGDITYK VNVKLDEYAK STDIDTKLGD YVKSVTGDDF
IKVDATKKQS PALSLDTDKL ANDSTFVTNI AGNKVFKNTY VTNDKLSDSG FKFTGDDTAK
EIDKKLGGTI SIKGGADSTK LSDKNIGVVA VNDSLQVKLA KNLLGLESAE FKKGADTTTV
SAEKGISTTK TLKVTDGSGN TVAEIDKTQI TDASGNKVTN INSAINNLYA TTKGLTSDNA
LAVKYDSSTK EKIMLGGSGA TKQVAIKNLA SAGDINDVNN KFNAVNAGDL KTALSGVNNS
IDNINNRNFI SLSVSANGGT KDDIKAKENI DFTATDGITV AYNASVNKFT FSADFDSIAN
NNVLSNKYAM LDGSNLIATK GFKQDAWRGA LGLTDANIAN IFEEGKDISI TKNSNNNKYT
IAYTGTGGGT GTGGMSEAEV KEIINNYIGG NIINPAKFNE KLITHDVSER KTTENKSIIA
AINRINKYGI GFVHVNGGDI TPDPTTGKSA NDSSAEGTNA IAIGPKSQAN RDNSIAIGLK
SQANGENSIA IGVGNVVTGK NSGAFGDPTY INGDNSYAIG NNNKIDSENT FVLGNEVRVG
ADMQGAVVLG SGSTAVDKAI EVSRAEVNGI TYDGFKGQAA GGMILSVGAK GAERQIKNVA
AGKILKDSTD AVNGSQLYAT NKIIGNVANS VKNVIGGNAK VNNNGEISAS DIGGTGQNNI
NNAIAYINKR NKSGNSYIDI DAPEGSVLPS VSKGSNSIAI GAGSSDDKRK NVVSVGNATK
GLNRTITNVA PGKYGTDAVN MNQLYGVAGG LSKQINDVKK KSSAGIAGAV ALGMLPQSNI
PGDALVSIGT GYHDSESAVA LGISKTSDNA RWIFKGGVSY DSQDEVTAGA SVGFHF