| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1289 |
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| Symbol | |
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| ID | 5408406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 1227560 |
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| End bp | 1228633 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640870968 |
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| Product | RluA family pseudouridine synthase |
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| Protein accession | YP_001406840 |
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| Protein GI | 154148379 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0438774 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGATAATTA TAGTAGGAAA AGGTAAAATT TTGGAAAATT TCGCGGTTAA AAATTTGAGT
TCATCTATTA GACTTGATAT TTTTTTGACA AAAATACTTA AAATTTCACG CAATAAAATT
TTAAATTTGA TAGAAGAAAA TCATATTTTT GTAAATAATT CGGTGCAAAA TAAAGCTTCA
TTCAAGCTAA AAAATGATGA TATCGTCGGT ATAAATTTTC CTTTAAAAAA GGAAAATGAA
AATTTAAAAC AAAATGCAAA TTTTGACATT GAAATTTTAT ACGAAGATGA CGATCTGCTT
GTTTTAAATA AACCGAGCGG AGTTGTAGTT CATCCTGCCA AAAGCGTCAA AGAACCGACT
TTGGCGGAAT GGCTGAAACA AAAAAAATAT ATGCTTTCAA GTATAAACGG CGATGAGCGG
GCAGGTATAG TTCACCGTCT TGACAAACAG ACAAGCGGTG CGATTTTAGT GGCTAAAACC
GATTTTGCTC ATGTTAAACT TGCCGCTCAA CTTAAAGATA AAAGTATGGG GCGGATTTAT
CTTGCTTTTT TAGATTTGGC ATTAAAAGAA AATGTCTGTG TTGACAGATT TATAGCAAGA
AATCCGTCAA ATCGCTTAAA AAAAGCGGTT GTGCCTCCAA ATGAAAACGG TGCAAGAAGT
GCCAAAAGCG CATTTTTAAA TATTGCAAAT GATACAATTT TGCAAAATTT CAAGCCTTTA
AATTTCAGCC AAAATCAAAC TAATTTTAAT CTTATAGCAG CCAAACTTTT TACCGGCAGA
ACGCACCAGA TAAGGGTTCA TTTATCAAGT ATCAATCGCC ATATTATAGG CGATTTTTTA
TATGGGTTTA AGAGCGATTT TGATAAAATT AAAAGAATTT TTTTGCACGC TTATTTGCTT
TATTTTACGC ATCCGCGCAC AAACAGACAA ATTTTAATCA GTGCGAAAAT ACCGAGCGAA
TTTAAAAATT TAATAGAAAA ATCTGACTTT AAGGATGAAA TTTATGAAAA AATTTTACCG
AGTAACCTTA TTAGCGCTTT TGACGATTGC GATCAGTGGA TGTGTCTCAA ATAG
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| Protein sequence | MIIIVGKGKI LENFAVKNLS SSIRLDIFLT KILKISRNKI LNLIEENHIF VNNSVQNKAS
FKLKNDDIVG INFPLKKENE NLKQNANFDI EILYEDDDLL VLNKPSGVVV HPAKSVKEPT
LAEWLKQKKY MLSSINGDER AGIVHRLDKQ TSGAILVAKT DFAHVKLAAQ LKDKSMGRIY
LAFLDLALKE NVCVDRFIAR NPSNRLKKAV VPPNENGARS AKSAFLNIAN DTILQNFKPL
NFSQNQTNFN LIAAKLFTGR THQIRVHLSS INRHIIGDFL YGFKSDFDKI KRIFLHAYLL
YFTHPRTNRQ ILISAKIPSE FKNLIEKSDF KDEIYEKILP SNLISAFDDC DQWMCLK
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