| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1275 |
|---|
| Symbol | trpA |
|---|
| ID | 5408279 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 1211508 |
|---|
| End bp | 1212251 |
|---|
| Gene Length | 744 bp |
|---|
| Protein Length | 247 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640870954 |
|---|
| Product | tryptophan synthase subunit alpha |
|---|
| Protein accession | YP_001406826 |
|---|
| Protein GI | 154148065 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0159] Tryptophan synthase alpha chain |
|---|
| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA TAAAAAAAGC GTTTGAAAAT GGAGCAAATA TCGGTTATAT CGTTGCCGGA
TATCCAAATG TAGAGCATAC GAAAAATTTT TTAAATTCAC TTGATGAGTG CGCACTTGAT
ATTGTTGAAA TAGGTATTCC ATATTCAGAT CCTTTAGCTG ATGGACCTGT GGTGTTTAAC
GCAAGCTTTC AGGCGGTGCA AAACGGCGTA AATACGGACA CTGTATTTAA AATTTTAAGT
GAAGTTGAAA CTAAAAAACC GCTTATTTTT TTAGTTTATT TCAATTTGAT TTTTGCCTAC
GGAATGAAAA AATTTATCAA AAAATGCGCT GAAGCTGGAA TTTCAGGTTT GATAATTCCG
GATCTTCCTT TTGAGGAAAA TGAAGAAATT TTTAAACTTT GTGAAAAAGA AAAAATCGCT
TTAATACCGC TAATAAGTAT AACAAGCGAA CATAGAGCAA AAAAAGTTTT AAGCAGAGCT
GGCGGATTTA TATACGCAAT ATCGGCAATA GGCGTAACAG GAACAAAACT AACTCCAATG
GAAAGACTAA AAAATATGCT TTCTGATCTT AAAAAAATGA GCGATTTACC GGTAGCTGTC
GGCTTTGGTA TACGCACAAA CGAAGATATA AGAAATATGC GCAAATACGC GGACGGTGTA
ATACTTGGAA CTTCTATCGT AAAACTTTCC GAAGAATTTG AAGGTAAAGA GTTTTTACAA
AAAATAAACG AGCTTTTTAA ATAA
|
|---|
| Protein sequence | MDKIKKAFEN GANIGYIVAG YPNVEHTKNF LNSLDECALD IVEIGIPYSD PLADGPVVFN
ASFQAVQNGV NTDTVFKILS EVETKKPLIF LVYFNLIFAY GMKKFIKKCA EAGISGLIIP
DLPFEENEEI FKLCEKEKIA LIPLISITSE HRAKKVLSRA GGFIYAISAI GVTGTKLTPM
ERLKNMLSDL KKMSDLPVAV GFGIRTNEDI RNMRKYADGV ILGTSIVKLS EEFEGKEFLQ
KINELFK
|
|---|
| |