Gene CHAB381_1264 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1264 
SymbolleuB 
ID5408140 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp1203285 
End bp1204352 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content41% 
IMG OID640870943 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_001406815 
Protein GI154149000 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGAAAT ACGATATTTG TGTCATAAAA GGCGACGGAA TAGGACCTGA GATTATAGAT 
GAAGCTGTAA AAGTACTTGA TGCGATTTCG CATAAATGCG GTTTTGAATT AAATTTCGAT 
TATTTTTTAA TGGGTGGCGC TGCGATTGAC GTTTTTGGCG AGCCTTTACC TAAAAATACG 
TTGGACGCTG CTTTAAAAAG CGATGCCGTG CTTTTCGGGG CTATAGGCGG AGAAAAATGG 
GATAAACTTC CTAGACATTT GCGTCCTGAA AGCGGACTTT TGCGAATCAG AAAAGAGCTT 
GGCGCTTTTG CAAATTTACG CCCTGCGATA ATTTTCGACG AGTTAATCAA TGCTTCCACA 
TTAAAATCTG AAGTTGTAAG CGGCGCAAAT ATAATGGTCG TGAGAGAATT AACGGGTGGA 
ATTTACTTTG GACAACCACG CGAAAAGCAC GAAAACGACG CGTTTAACAC AATGGTTTAC 
AGTTCAATGG AAATAGAGCG CGTGGCGAAA GTAGCATTTG AAACTGCGAT GAAACGCCAT 
AAAAAAGTTA CTTTGGTGGA TAAGGCGAAT GTTCTTGAGA CAAGTCAGCT TTGGCGTGAA 
GTAGTAGAAA ATGTAGCCAA AGATTATAAG GAAGTTGTGC TTGATTTTAT GTATGTGGAT 
AATGCAGCTA TGCAGCTTGT GCGTGCGCCA AAGCAATTTG ACGTGATTTT AACGGAAAAT 
CTTTTTGGAG ATATTTTAAG CGATGAAGCA AGTATGGTTT GTGGAAGTAT CGGGCTTTTG 
CCAAGTGCAA GTATCGGCGG TAAAACAGGA ATATATGAAC CGATTCACGG AAGTGCGCCT 
GATATCGCAG GACAAGGCAT AGCAAATCCT ATCGCTACTA TTTTAAGCGC CTCTATGATG 
TTAAGATATG CTTTAAATGA AACAGCCGGA GCAGATATGA TTGAAAAAGC CGTAAAATCT 
GTATTAAAAG ACGGTTATCG CACAAAAGAC ATTGCAAATT TCGACGCAAA AGAGCTTTGC 
ACTACAAGCG AAATGGGTTC GATAATTGCG GATTACGCGA GCAAATAA
 
Protein sequence
MKKYDICVIK GDGIGPEIID EAVKVLDAIS HKCGFELNFD YFLMGGAAID VFGEPLPKNT 
LDAALKSDAV LFGAIGGEKW DKLPRHLRPE SGLLRIRKEL GAFANLRPAI IFDELINAST 
LKSEVVSGAN IMVVRELTGG IYFGQPREKH ENDAFNTMVY SSMEIERVAK VAFETAMKRH 
KKVTLVDKAN VLETSQLWRE VVENVAKDYK EVVLDFMYVD NAAMQLVRAP KQFDVILTEN 
LFGDILSDEA SMVCGSIGLL PSASIGGKTG IYEPIHGSAP DIAGQGIANP IATILSASMM 
LRYALNETAG ADMIEKAVKS VLKDGYRTKD IANFDAKELC TTSEMGSIIA DYASK