| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1225 |
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| Symbol | |
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| ID | 5409157 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 1159849 |
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| End bp | 1161999 |
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| Gene Length | 2151 bp |
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| Protein Length | 716 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640870906 |
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| Product | penicillin-binding protein |
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| Protein accession | YP_001406779 |
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| Protein GI | 154149036 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4953] Membrane carboxypeptidase/penicillin-binding protein PbpC |
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| TIGRFAM ID | [TIGR02073] penicillin-binding protein 1C |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.555971 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAATTT TAATGAAACT TATTGCATTT ACGGTTGCGA TTTTTACACT GTTTTTGATT
TTTGATTTTG CTTTTCCTCT AAATTTAGGC AGCAAATTAA CGGATGAAAG CAAAATTATA
TATGCCAAAA ACGGCGAAAT ACTGAATATG TCGCTCAATA AAAACGGAAT TTGGTTTATA
AAAGCAAACA ATAAAGAAAT TCCCAAACGC GTGAAGCAAA GCGTAATTTT TTTTGAAGAC
AGATATTATA ACTACCATTT CGGCGTTAAT TTTTTCTCTG TTTTAAGAGC TGCTTTTCAC
AATCTAACAC ACAAAAACCG TATCGGCGCA TCAAGTATTT CAATGCAGGT TGCAAGAATG
CTGAATCCAA AAGAGCGCAG CTACAAGAAT AAAATAATCG AAATTTTCAA CGCTTTTCAG
CTGGAATTTC ATTACAGTAA AGATGAAATT TTGCAAATGT ATCTCAATCT TGCACCTTAC
GGCGGTAATT TGCAAGGCAT AAAAACAGCG TCACTATTTT ATTTCGGGAA AAATTTAGAC
GATCTTACAA ATGCGCAAAT CGCCCTGCTT TGTGTAATTC CAAAAAATCC TAACAAAAAC
AGGCTTGATA AAATTTCAAA CATTTCAAAA CTTAAAAATT CTCTCATAAC CAAACTTTAC
GAAGCGGAAA TTCTAACAAA AAGCGAATTT TTAAGGGCAA AAAAAGAGAA TTTCAAAAAC
AAACGTTTAA GCGCACCGAA TTTTGCGCCC AATTTCGCAC AAATTGCCTT TAAAAACGGT
ATTTCACACA CAAATTTAAA CTTAAAATTT CAAAAAAAAT TAGAACAACT GCTTAAATTT
GAAATTGAAA AACTTAGTTC AAAAAATGTC AAAAACGCAG CTGCAGTTTT AATCGATAAT
AAAAAAATGC AAGTAGTTGC TTACGTGGCA AGCCACGATT TAAAGGCGAA AAACGGACAA
AATGACGGCG TAAAATCCAT AAAAAACGTA GGTTCCACAC TAAAACCGTT TATCTATGCA
AAAGCCTTGG AAAAAGGACT TATAACGCCA AAAAGCAAAT TAGTAGATAC ACAACTTTAT
TATAAAAACT ATACGCCGAA AAATTATTTT GACGATTTCG TAGGCATTGT AAGAGCCAAA
GACGCACTTA CATATTCTTT GAATATTCCT GCTTTGAAGT TAAATTCCAT TTTAGGAGAA
GATTCTTTGT ATTTTATACT TAAAAGAGCT GATTTAACGG AATATGACGA AGAATTTTAC
GGCAACGGAA TCGCGCTTGG CGGAATTTCG CTTTCGCTTC TTGATTTGAC TCATCTTTAC
ACGATATTTG CAAACGGCGG CAAACTTCTA CCGCTTGAAA TTGCAGGCGA AAAAATAGAT
AAAAATATCT CTATTTTAAC GCCGCAAAGT GCATATTTGA CGTATCTTAT GCTGGAGCAA
ACTCCACGAA ACTATCTAAA CAGCGTTTGG AAAAATACAA AAAATAAACC GCACATTATG
TTTAAAACCG GCACAAGTGC GGATTCAAAA GATCTTTACA CAATCGGGGT CAGCAAAGAT
TTTACTCTTG GCGTGTGGCT TGGAAACTTT GACGGCTCTA AAACCGATGA TTTGAGCGGT
GGCATAAGCG CAGCCGAAGT CGTATTAAAT ATGTTTGAAT ATCTAGATAA AATTTCGCCT
CAAAAACAAA TTGAAAAACC GAACGGAATT TTTGAAGAAA AAGTGTGCTG CGATGCTTAT
ATAAATGAAT CTTGCAATGA TTTTCAAAAC GATTTCGTTA TAACGAAATT TCATAGAGAT
TGCGATTTCT ACAGGCCTGA AGAGCTATTT TTTATGTTTA AAAACGGTTA TTTAAACCAA
AACGATATAA AAAATACGCC ATGCTTTAAT GAATTCAGCA GTATTCGCCC TGTTTTAAAT
GAAATTGACG GTAAAAATTA TAAAACAGAT AAAAAATTAT TAAGGTTGAA AATATCATGC
ACAGCCGTTT TCGGGGATGA AGTTTTCATC TCGATCGACG ATGAAAAATA TATAAGTTTT
CCAAACGGAA AAGATATTTT TTATTCATTT AAAAAAGGTG CACATACTAT AAAATGCCTT
GATATTTATT CTAATTTAAG CGTTGCCGAA TTTAGCACTG ATAGCCTGTA A
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| Protein sequence | MKILMKLIAF TVAIFTLFLI FDFAFPLNLG SKLTDESKII YAKNGEILNM SLNKNGIWFI
KANNKEIPKR VKQSVIFFED RYYNYHFGVN FFSVLRAAFH NLTHKNRIGA SSISMQVARM
LNPKERSYKN KIIEIFNAFQ LEFHYSKDEI LQMYLNLAPY GGNLQGIKTA SLFYFGKNLD
DLTNAQIALL CVIPKNPNKN RLDKISNISK LKNSLITKLY EAEILTKSEF LRAKKENFKN
KRLSAPNFAP NFAQIAFKNG ISHTNLNLKF QKKLEQLLKF EIEKLSSKNV KNAAAVLIDN
KKMQVVAYVA SHDLKAKNGQ NDGVKSIKNV GSTLKPFIYA KALEKGLITP KSKLVDTQLY
YKNYTPKNYF DDFVGIVRAK DALTYSLNIP ALKLNSILGE DSLYFILKRA DLTEYDEEFY
GNGIALGGIS LSLLDLTHLY TIFANGGKLL PLEIAGEKID KNISILTPQS AYLTYLMLEQ
TPRNYLNSVW KNTKNKPHIM FKTGTSADSK DLYTIGVSKD FTLGVWLGNF DGSKTDDLSG
GISAAEVVLN MFEYLDKISP QKQIEKPNGI FEEKVCCDAY INESCNDFQN DFVITKFHRD
CDFYRPEELF FMFKNGYLNQ NDIKNTPCFN EFSSIRPVLN EIDGKNYKTD KKLLRLKISC
TAVFGDEVFI SIDDEKYISF PNGKDIFYSF KKGAHTIKCL DIYSNLSVAE FSTDSL
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