| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1213 |
|---|
| Symbol | sppA |
|---|
| ID | 5407969 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 1148827 |
|---|
| End bp | 1149702 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640870894 |
|---|
| Product | signal peptide peptidase SppA, 36K type |
|---|
| Protein accession | YP_001406767 |
|---|
| Protein GI | 154148512 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0616] Periplasmic serine proteases (ClpP class) |
|---|
| TIGRFAM ID | [TIGR00706] signal peptide peptidase SppA, 36K type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGAGTTT TAAAAGAAAT TTTTGGAACT TTAGGTGAAA TTTTAGGATT TATCAATAAA
TATTTTAAAG CTATGATTTT TTTGCTTTTG GTTTATTTGA TATTTTTTAC CGGTCAAAGC
GATGAAATAG AACAGGCAAA TCTTGCTGAA ATACGCTTAA ATGACGCTAT AATGGATGCA
AATGACGTTT TGGAAAAAAT TTATGCTAGC AGCGACAATG AAAATATAAA AGCGGTACTT
TTTAATATCG ATAGCCCTGG TGGCGCGCTA AGTCCAAGCG TGGAAATATC TAAAGCGATA
AAAGAGCTAA ACGAGAAAAA ACCTGTAATC GTATATGCAA GCGGAACAAT GGCCAGCGGA
AGCTATTTAA GCGGAGTTTG GGCGCGTAAA ATTTTAGCAA ATGAAGGCTC ATTTATAGGC
TCTATCGGCG TTATAATGCA AGGCGCAAAT ATAGAAAATC TTGCAAATAA AATCGGCATA
TCTGAGCAAA CCGTAAAAGC AGGAGAATAT AAGGAAGCCG GCACTTTTAT GCGTGCGTGG
AATGAAAATG AACGCGAAAG CCTGCAAAAT CTTGTGGATA AAAGTTACAG TTTTTTTGTC
AATGAAGTAG CGAATGCAAG ACATTTAAAT ATAGACAATA ACGAAACCTG GGCAAATGCA
CGCGTTTTTT TAGCTGATGA TGCTCTGAAA TTAGGTTTGG TTGATGAAAT TTCAACTTAT
AAAAGAGCAA AAAACGAAAC TGAAAAAATT TCAGGTGTTC TTAATCCGGT TTGGCAAGAA
GAGCCGTTTT ATGAAAAAAT GCTAAAACGT CTTGAAACAA GCACAAAGAG CCAAATTTTA
GGAACTTTTA CAAATAAAAT TTTGGCTATA AATTAA
|
|---|
| Protein sequence | MRVLKEIFGT LGEILGFINK YFKAMIFLLL VYLIFFTGQS DEIEQANLAE IRLNDAIMDA
NDVLEKIYAS SDNENIKAVL FNIDSPGGAL SPSVEISKAI KELNEKKPVI VYASGTMASG
SYLSGVWARK ILANEGSFIG SIGVIMQGAN IENLANKIGI SEQTVKAGEY KEAGTFMRAW
NENERESLQN LVDKSYSFFV NEVANARHLN IDNNETWANA RVFLADDALK LGLVDEISTY
KRAKNETEKI SGVLNPVWQE EPFYEKMLKR LETSTKSQIL GTFTNKILAI N
|
|---|
| |