Gene CHAB381_1206 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1206 
SymbolmnmA 
ID5408387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp1143063 
End bp1144169 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content33% 
IMG OID640870887 
ProducttRNA-specific 2-thiouridylase MnmA 
Protein accessionYP_001406760 
Protein GI154149044 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain 
TIGRFAM ID[TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAATTT TAGTTGCTCT TAGCGGTGGT GTCGATAGTG CCGTTTCGGC TAAAATTTTA 
AAAGATGCGG GTTATGAAAT AGAAGGATGC TATATGAAGC TTCACGGAAG AGATGATTAT 
CACGCTAAAA ATATTGAAAA AGTGCAGGAT GTAGGCAATT TTTTGGAGAT AAAAACGCAT 
ATTTTGGATC TTTGCGATGA TTTTAAGCGT GAAGTTTTTG AGCCGTTTCT ACAAACTTAT 
AAAGTCGGCA AAACCCCAAA TCCGTGCGCT TTATGTAACA GAACAATAAA ATTCGGTAAA 
TTTTTGGATT TTGCCAGGAG TAAAGGTTGT GACAAAATCG CAACGGGGCA TTACGCAAAA 
ATCGAAAATA ATCTTATAAA ATCTGCAGTT GATCTTAGTA AAGATCAAAG CTATTTTTTA 
GCAAATATCG AGCCGCGTGT AATTCCAAAT ATAGTTTTTC CGCTTGGAAA TATGCTCAAA 
AAAGATGTCA AAAAGTTCGC CGCTTCATTT CCTGAGCTTG AGAAAATTTC AAAAAGCAGT 
GAAAGTAATG AAATTTGTTT TGTGGAAAAT ACATATATCG ATGTTTTGAG AGAATTTTAT 
AAAACTGAAA CTCCTGGCAT TGTTAGAAAT TTACAAGGAG AAATCGTCGG CAAACATAAC 
GGCTATATGA ACTTTACTGT AGGTAAACGC CGCGGATTTG ATGTTTTTGG CGCGCACGAA 
CCGCATTATG TCGTAAAAAT AGATGCTAAA AAAAATGAAA TAGTAGTCGG AAGCAAAGCA 
GATCTTGACA AAAACGAGTT TGAAACGCAA AATTTTAACG CTTTTTTAAA TATAGATGAA 
ATTTTAAAAA TGGATGAAAT TTATGTAAAA ATTCGTTATC GAAGTGCTAA AATAGCGTGT 
AAAATTGAAA TTTCACTTAA CGATAATTTA AACAATGAAA GTTTAACCGA TAAAAATTTA 
AATTTTGAAA ATTCAGATTT TTTAAATAAT CAGGACCTAA AAGCCAAAAT TATTTTAAAA 
ACACCTGCAA ATGGAGTTGC AAGCGGACAG CTTGCCGTAT TTTATGATAA ATCCGACTGC 
GTAATTGCAA GTGGTTTTAT AGCTTAA
 
Protein sequence
MKILVALSGG VDSAVSAKIL KDAGYEIEGC YMKLHGRDDY HAKNIEKVQD VGNFLEIKTH 
ILDLCDDFKR EVFEPFLQTY KVGKTPNPCA LCNRTIKFGK FLDFARSKGC DKIATGHYAK 
IENNLIKSAV DLSKDQSYFL ANIEPRVIPN IVFPLGNMLK KDVKKFAASF PELEKISKSS 
ESNEICFVEN TYIDVLREFY KTETPGIVRN LQGEIVGKHN GYMNFTVGKR RGFDVFGAHE 
PHYVVKIDAK KNEIVVGSKA DLDKNEFETQ NFNAFLNIDE ILKMDEIYVK IRYRSAKIAC 
KIEISLNDNL NNESLTDKNL NFENSDFLNN QDLKAKIILK TPANGVASGQ LAVFYDKSDC 
VIASGFIA