| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1201 |
|---|
| Symbol | |
|---|
| ID | 5408013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 1139662 |
|---|
| End bp | 1140795 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640870882 |
|---|
| Product | type I secretion target GGXGXDXXX repeat-containing protein |
|---|
| Protein accession | YP_001406755 |
|---|
| Protein GI | 154148928 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.12617 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATGAAA ATTCAAAAAT ACAAAAAGCT AAGAAAATTT TAGATATTGC AGAAGCAGAT
TATAAAAAGA AACTTTCTAA AGAAGAGTTG GATTTTTTAA AATCTTCAAA ACATATGTAT
GATTTAGCTT CTACTGCAAT TAGTGACCAT TATGACGAAT TGTCACATCT GCCAAAAGGT
GCTGGTGCTA TATTTATAAT TAATGGTACA AGTAGCATTT TAGTGGATAC AACAAAAGGG
GAAAGCGCTT TAAAGCAAGC TTTTGGATTG TTAGGTGACG CCGCTGTAAC TGTTTTTTCT
TTTACGCCTT ACGGAAGAGT TATAATGTGG GGAAATCTTG CTTTATCGAT ATTTGACTTA
GACGCATCGT CAATGTTTAA AAAAATTTAT GATAGCGCTT TGGGTGATTA TAAAGGTGCA
GTGTTACTTG ATAATGGTTT TTTACAAGTA ACTATGGATG ACGGAACAAT CTATGCAAGA
CCTTTTTTGC CAAATGCTCA CGGCAGTCTT TTTGGCGACA CCAAAGACGA TGTCCTCTTT
GGTGGCAACG GTAATGATAT GCTGATAGGT CACGGTGGCA AAGACATACT AATCGGTGGA
AACGGTAAGG ATGATTATTT CGTAGATAAT GGAGATATCA TAAAAGACAG TGATGGAAAT
GGTAGAGTAT TTTTAGAAAA TCATCAATTA ACAGGAGGAA CTCAAATAGA AAAGGGTTCA
CAAATTTATA AAGGCAAAGA CGGCACAAAG TATGAACTCA AAGGCTCAGA CCTTATAATC
AACGATAGCA TAACAATAGA AAATTTCAAT CCTTATGCGG ATGAATATTT AGGCATAACT
TTATACGAAG CAGGTGAAAT AGCAGTAAGC GTATCAAGCG CTAGTGCAAA AGAAAAAGAG
CAAAGTATAA GCTTTACAAT CTCACTTAGT AGGAATTTGA AAGAAAATGA ATTCATCAAA
GTCACCATAC CTAAAATAGG TAATAATGAA GCAAAAACTT ATATGTTTAT ACATAGTAGT
AGCACGGATT GGAAAGTAGC AGACGGCATA GAGTATATCT TTGGTAGCAG CACAAGCTAT
ACATATTCGT GGAGCGATTT AGAATTTGCA AATTTAAATT TACTTGTTGC TTGA
|
|---|
| Protein sequence | MDENSKIQKA KKILDIAEAD YKKKLSKEEL DFLKSSKHMY DLASTAISDH YDELSHLPKG
AGAIFIINGT SSILVDTTKG ESALKQAFGL LGDAAVTVFS FTPYGRVIMW GNLALSIFDL
DASSMFKKIY DSALGDYKGA VLLDNGFLQV TMDDGTIYAR PFLPNAHGSL FGDTKDDVLF
GGNGNDMLIG HGGKDILIGG NGKDDYFVDN GDIIKDSDGN GRVFLENHQL TGGTQIEKGS
QIYKGKDGTK YELKGSDLII NDSITIENFN PYADEYLGIT LYEAGEIAVS VSSASAKEKE
QSISFTISLS RNLKENEFIK VTIPKIGNNE AKTYMFIHSS STDWKVADGI EYIFGSSTSY
TYSWSDLEFA NLNLLVA
|
|---|
| |