| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1191 |
|---|
| Symbol | |
|---|
| ID | 5408964 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 1127329 |
|---|
| End bp | 1128615 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640870873 |
|---|
| Product | ApxIVA Var3 |
|---|
| Protein accession | YP_001406746 |
|---|
| Protein GI | 154148269 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.171556 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGAAAAG ATGGTAGCGA CTTACTAATC GGTGGCAAAG GCGATGACAC ATACCTAGCT
ACCAAAGGCG ACACCATAAA AGACAGCGAC GGCAAAGGCT CAGTTCATTT CAACAGACAC
AAACTAACAG GCGGAACTTA TGATAAAGAC AGAGACCTTT ATATTTCAGA TGATTATATC
GAATACAAAC TCCACGATGA CGGAAGATTA GTAGTAAGTG ATATGGGAGA AAATATAGTC
ATAGAAAATT TTAATAAAGA CAATAATGAT TTAGGCATAA TACTAATAGA CCCAAAAGAT
GTAGTAGTTA CCATACACGA CAATCAAGCA AATGAGGGTG GCAACGGCAA ACATACGCTA
GGGTTTAAAG TAAGTTTAAA TAGAAAATTA GAAGCAGGAG AATACTTAAC ACTATACATA
AACGGACAAT TGGTTAAATT TACAGAAAAT GAACAAGAAA AAGATAATGC TTATATCTAT
GAGTGGGACG GAAACGAAAG CAAAGACGGA GATAGAAAAT TTGAAGTAAG TGGCTCTGTT
TTACAAAGTG GAACTTCTAA AAATCTAAAT GTAAAATATA TTCACCCTGC AAAAGGTCTC
ATCAAAGACG ACGACCGTGA CGATGACCCT GACCCAGAGC GTGAATATTC TCCGATTGTG
ATTGACTTGG GTAATGATGG CATAAACTCA CACGCACTAA ATTATACTAT AAATTTTGAT
TTAGATAATA ATGGTTTTAA AGAAGCCACA GGTTGGGTAA GCGGCGATGA TGCACTTCTA
GCAATAGATA AAAATAACAA CGGCATAATA GATAATGGAA GCGAACTCTT TGGAAATAAA
AGTATCTCAG ATAGTGCTTT CTCATACACA AATTCATCTT TAAACAACGG CTTTGAAACA
CTAAAAAGCT ATGACAGCAA CAATGACGGC ATAATAGATA GCCAAGACGC TGAATTTGAC
AAGCTACTTC TTTGGCAAGA TAAAAACGGC AATGCCATCA CAGATAACGG AGAGCTTATA
AAGCTAAGTG ATAAAGTAAG CTCAATAGAT CTAAACTACA CAAACACAGA TATAAACAAT
AACTCAAACA CCATAAAACA AACTTCAACT GCTACGCTAA ATAATGGCAC AAAGGTAAAA
GCAGATGATA TATGGTTTAA GGTAAATTAC AAAGACACAG AAGAAATCAT AGATGAAAAT
GAAATTCCAT TTGAGATAAA ATCACTTCCA CAAATCACAG CGTTTGGGAA TTTAAAAGAA
TTTGCAAATT TAAATTCAAA CAAATAG
|
|---|
| Protein sequence | MGKDGSDLLI GGKGDDTYLA TKGDTIKDSD GKGSVHFNRH KLTGGTYDKD RDLYISDDYI
EYKLHDDGRL VVSDMGENIV IENFNKDNND LGIILIDPKD VVVTIHDNQA NEGGNGKHTL
GFKVSLNRKL EAGEYLTLYI NGQLVKFTEN EQEKDNAYIY EWDGNESKDG DRKFEVSGSV
LQSGTSKNLN VKYIHPAKGL IKDDDRDDDP DPEREYSPIV IDLGNDGINS HALNYTINFD
LDNNGFKEAT GWVSGDDALL AIDKNNNGII DNGSELFGNK SISDSAFSYT NSSLNNGFET
LKSYDSNNDG IIDSQDAEFD KLLLWQDKNG NAITDNGELI KLSDKVSSID LNYTNTDINN
NSNTIKQTST ATLNNGTKVK ADDIWFKVNY KDTEEIIDEN EIPFEIKSLP QITAFGNLKE
FANLNSNK
|
|---|
| |