Gene CHAB381_1081 details

Gene Information

• Locus tag: CHAB381_1081
• ID: 5409652
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 1016759
• End bp: 1018681
• Gene Length: 1923 bp
• Protein Length: 640 aa
• Translation table: 11
• GC content: 36%
• IMG OID: 640870766
• Product: macrolide export ATP-binding/permease protein MacB
• Protein accession: YP_001406639
• Protein GI: 154148879
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATAGATT TAATAAATAT AAATAAAAAT TTTCCATTAG GCGATTCTCA AATTAACGTT 
TTAAAAAATA TAAATTTACA TATAGATAAA GGCGAATTTG TAGCTATAAT CGGTCAAAGC 
GGATCCGGAA AATCGACATT GATGAATATA ATAGGTTGTC TTGATACGCC AAGCAGCGGT 
GAATATAAAA TCGAAAACCG CGATGTAGCA CATTTTACAA GTGACGATCT TGCAAATTTA 
AGAAGCAAGA AATTCGGCTT TGTATTTCAA AGATACAATC TTATATCTTC AATGAATGCA 
CTTGAAAATG TCGCACTGCC GGCTGTTTAT GCAGGTGCAA GCACTGAATT TCGCACAAAA 
AGGGCAAAAG AAATTTTAAA TGAGCTTGAT CTTAAAGATA AAATGCAAAA TTTACCTAAC 
AAACTATCAG GCGGACAACA ACAACGAGTT TCAATTGCAA GAGCTTTAAT AAACGGCGGC 
GAAATTATTT TAGCCGATGA ACCGACAGGC GCACTTGACA GTAAAAGCGG CGAAACGGTA 
ATGCAAATTT TTACGGATCT TTACAAAAAA GGTCATACAA TAATAATGGT AACTCACGAT 
AAACACGTAG CAAGTTATGC AAGTCGCATC ATAGAAATAA AAGACGGCGA AATTTTAAGC 
GACACAAAAA AGAACGATGA AATTTTTGAA TTAAAAAGCG AAGAAATCGT CCAAAAAAAT 
ATTTTTTCAT CTTATAAAGA TAGATTTATA GAAAGCTTTA AAATGTCCGT AAGTGCAATA 
TTTTCACACA AACTCAGATC TGTTTTAACC ATGCTTGGAA TAATAATAGG AATTTCATCT 
GTAATTTGCG TCGTGGCGCT AGGCAAAGGC TCGCAAGAAA AAATAATCTC GTCAATAAGA 
GCGATAGGAA CCAACACAAT AAATATAATG CCTGGAAAAA GCGCAGCCGA CGCAAGACTT 
AATAAAATAA AAACTTTAAC AATAGAAGAT TCAAATGTGC TTGCAAATCA GCCTTATATT 
GACTATTCCA CACCAAATAC AAGTGCAAAC GGACTTATAG CTTACGCAAA TCTCAGCTCA 
AACGGCATTC TTAGCGGCGG AGGCGCGAAT TCTCTCGCTA TAAGAAGCGT AGAACTTCAA 
AGTGGGCGAA ATTTTACCGA TGACGACATA AAAAATTCGG CTTCAGTTGT AATTATAGAT 
CAAAATACCG TTGATACATT TTTTACAAAC ACGGATCCGA TAGGCAAAAT TTTACTTTTT 
AAGAACAGAC CGCTTCTAAT AATAGGCATG GCGGAAAATG AAAAATTCAG TTCTCAAGAC 
AGATTAAAAA TTTACGCACC TTATACGACC GTAATGAATA AAATCAGCGG AAACCGTGAT 
ATCAGCTCAA TTACTGTAAA AATCTCTGAT AATGTCAGTA CAAAAACGGC TGAAGACAGT 
ATCACGGCAA TCCTTACAAA ACGTCACATA ATAAAAGATT TTCACACCAG AAACTCCGAC 
ACCATAAAAG AGACAATAGA AAGTACAATG GGAACGATGA GACTTCTTAT TTCATCAATA 
GCCGTTATTT CACTGATAGT AGGTGGAATC GGCGTAATGA ATATAATGCT TGTAAGTGTA 
ACGGAACGCA CTAAAGAAAT CGGCGTAAGA ATGGCGATAG GCGCAAAAGA ATCAAATATT 
TTAGAGCAGT TTTTGATAGA AGCGATTCTG CTTTGCTCGA TCGGCGGAGT GCTTGGAATT 
ATAATCGCAC TCGGTTTCGG TGCCGCTTTC AATTCAGTAA GCAGCGATTT TGTAATGAAA 
TTTTCGCTAA TGCCAGCAAT TACCGCGTTA ATCGCATCTT GTGCTATAGG TATTGTTTTT 
GGATACTTGC CGGCTAGAAA CGCAAGCAGA TTAAATCCGA TAGATGCACT TTCACAGGAG 
TAA 

 

Protein sequence

MIDLININKN FPLGDSQINV LKNINLHIDK GEFVAIIGQS GSGKSTLMNI IGCLDTPSSG 
EYKIENRDVA HFTSDDLANL RSKKFGFVFQ RYNLISSMNA LENVALPAVY AGASTEFRTK 
RAKEILNELD LKDKMQNLPN KLSGGQQQRV SIARALINGG EIILADEPTG ALDSKSGETV 
MQIFTDLYKK GHTIIMVTHD KHVASYASRI IEIKDGEILS DTKKNDEIFE LKSEEIVQKN 
IFSSYKDRFI ESFKMSVSAI FSHKLRSVLT MLGIIIGISS VICVVALGKG SQEKIISSIR 
AIGTNTINIM PGKSAADARL NKIKTLTIED SNVLANQPYI DYSTPNTSAN GLIAYANLSS 
NGILSGGGAN SLAIRSVELQ SGRNFTDDDI KNSASVVIID QNTVDTFFTN TDPIGKILLF 
KNRPLLIIGM AENEKFSSQD RLKIYAPYTT VMNKISGNRD ISSITVKISD NVSTKTAEDS 
ITAILTKRHI IKDFHTRNSD TIKETIESTM GTMRLLISSI AVISLIVGGI GVMNIMLVSV 
TERTKEIGVR MAIGAKESNI LEQFLIEAIL LCSIGGVLGI IIALGFGAAF NSVSSDFVMK 
FSLMPAITAL IASCAIGIVF GYLPARNASR LNPIDALSQE