Gene CHAB381_1071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_1071 
Symbol 
ID5407967 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp1005616 
End bp1007301 
Gene Length1686 bp 
Protein Length561 aa 
Translation table11 
GC content33% 
IMG OID640870756 
Productputative cell division protease FtsH-like protein 
Protein accessionYP_001406629 
Protein GI154148871 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0465] ATP-dependent Zn proteases 
TIGRFAM ID[TIGR01241] ATP-dependent metalloprotease FtsH 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGG AAACGAAGCA AATTTTGCAG AATTTTAAAC CGAATAAGCT GAATATTATT 
CTTATTTTGT CGTTTTTGCT GATTATTTTG CTGATGATTG TTTATTTTAA GGACGATACG
ATTTTTATTA AACAGAGCGA TTATAAAAAT TTAATTTCGC AAGAAGGCAT ATCAAATGCA
GATATAACGC TAAAAGATGA TGTTTTATAT ATTCATTTTA ACGGTAGAAA TTATGCTATT
TTAAAAGATT TGGCGGATAT CGATGAACTT GGAAAAATCG CTCTTATAAA AAAAGAACAA
AGCGGCGAAG AGATTTCCGT TTTTTCTATT TTATTTATAG TTTTTATATC TATTATTTTG
ATTTATATGC TTGAGATAAT GATTTTACGC AAACGAAACA GGATAATTTC TCAAATCGCC
GTCCAAAAAA GCAATGCGGA AAATTTCGGT CTTGATATAA CTCCTGTAAT TTCAAATGTA
AAATTTAAAG ATGTAGCAGG AATAAGTGAA GTAAAAGATG AACTCATTGA AATTGTCGAT
TTTTTGAAAA ACCCTGAAAA ATATAAAAAT TTCGGAGTTA AACTTCCAAA AGGCGTTTTA
ATGATCGGAC CTCCCGGAGT CGGAAAAACT CTCATTGCAA AAGCTGTCGC CGGGGAAGCC
GGCGTACCGT TTTTTTATCA AAGCGGAGCA AGTTTTGCCG AAATTTTTGT AGGAGTCGGT
GCAAAAAGAG TAAGAGAACT TTTTGCGAAA GCAAAAGCGG TAGCACCTTC GATAATTTTT
ATCGACGAAA TAGATGCTGT CGGTAAAACT CGTGCAAAAG GGCGAAATGA TGAGCTTGAA
AGCACTTTAA ATCAATTGTT GACAGAAATG GACGGATTTA AAGAAAATAA CGGAGTGATT
GTAATCGCAG CTACAAATAA AGCCGAAATG ATTGATACTG CGCTACTTAG AGCAGGAAGA
TTTGATCGTA GAATTCTTAT AGCTTTACCG AATTTTGCCG ATAGAGTTGA AATTTTAAAA
GTTTATTTAA AAGATAAGAA TTTTATCGGT GACGTGGCTA AAATAGCCGG AATTTGCGTA
GGATTCAGCG GAGCTTCAAT AGCAACTCTT GTAAATGAGG CAGCAATCAA TGCAATGAGG
CGAAATAGCG AAAAAATCGA GCTTAGCGAT TTTGAAGCCG TTAAATCGAA AGTGCTTTTA
GGTTCTAAAA AAACGATAGC TTTGAGTGAT TACGAAAAGG AGATTCAAAG CTATTATCAG
GCAAGCAAGG CTTTAACGGC ATTCTGGTTT AATGTTGATT TTGAAAAAAT CGGGCTTTTG
GATGAAAAAT TTTTAAATTT TGACACGCAA ATTGATTCTA AAACTAAAAT TATAAATGAA
ATAAAAGTTT TACTTTCAGG CGTTGCGGGA CTTAAAATTT ATAAAAACGA CGCATTCAGC
AATGGAAGTA AAGATATAAA AAAAGCTGCA TTTTTGGCTG AAAAAATGAT TTTCGATTAC
GCTATGGGAG ATAATTTAAT TCCAAATGAA CGCGAAATAA CCGATATTTT GGAAAATTCT
TATAATGAAG TAAGTGAGCT TTTGAAAAAT AAAGGAGACG AACTTGCAAA AATTGCAAAA
CGCATTTTTG TTTATGAATT TGTTGAGTTT AAATTTGTAG GCGATACGCT TTTGGGGGCG
AAATGA
 
Protein sequence
MKLETKQILQ NFKPNKLNII LILSFLLIIL LMIVYFKDDT IFIKQSDYKN LISQEGISNA 
DITLKDDVLY IHFNGRNYAI LKDLADIDEL GKIALIKKEQ SGEEISVFSI LFIVFISIIL
IYMLEIMILR KRNRIISQIA VQKSNAENFG LDITPVISNV KFKDVAGISE VKDELIEIVD
FLKNPEKYKN FGVKLPKGVL MIGPPGVGKT LIAKAVAGEA GVPFFYQSGA SFAEIFVGVG
AKRVRELFAK AKAVAPSIIF IDEIDAVGKT RAKGRNDELE STLNQLLTEM DGFKENNGVI
VIAATNKAEM IDTALLRAGR FDRRILIALP NFADRVEILK VYLKDKNFIG DVAKIAGICV
GFSGASIATL VNEAAINAMR RNSEKIELSD FEAVKSKVLL GSKKTIALSD YEKEIQSYYQ
ASKALTAFWF NVDFEKIGLL DEKFLNFDTQ IDSKTKIINE IKVLLSGVAG LKIYKNDAFS
NGSKDIKKAA FLAEKMIFDY AMGDNLIPNE REITDILENS YNEVSELLKN KGDELAKIAK
RIFVYEFVEF KFVGDTLLGA K