Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_1052 |
Symbol | |
ID | 5408467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 988623 |
End bp | 990380 |
Gene Length | 1758 bp |
Protein Length | 585 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640870737 |
Product | general secretion pathway protein E (Type II traffic warden ATPase)(cholera toxin secretion protein EpsE) |
Protein accession | YP_001406610 |
Protein GI | 154149313 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAAAAG ATAGTATAGA AATAACGATT TTAAAAATTC TGATAGATCA TGGAATTTTA AATGAATCTT TGATTCCTGA AATCAAAGAA AAAATGGATA TAGGCTTAAC TCTCGGCGAA GTGTTAATTG GCGACAACTA TGTAAATCAA GAAGGTTTTA TCGCTCTTTT GGCTGAGCTT TATCGCAAAA AGATGACTAA TCTTGATGAA ATTTACGAAA AATTCAGTAT TGATACAAAG ACGTTTTTAC CAGTTTTGGC CAAACTGGCA AAACTGGAAT ATATGAATTT GGACGATATT GACATTGATT ATAAACTTTC AGATAGAGCA CCTACTGCGC AACTAAAAAG ATATGGTGTA ATGCCTGTAA AAGAGGATGA TTTAAATACA TATGTTGCTT TTGCAGATCC TTTTAATCTT GATGCGCAAG ATCGTGTTCA AAGAATATTT AATAAAAAAC TTGTCAAAAT AGTAGTCGCA GATCCTAAAC AAATTACAAA ATATATTTCA AAAATCGAAC TTAGTGAAAG CATAAAAGGG CTTGTAGCTG AAATTAGAAA TGAACTTAAT TCAATCGGTC AGGCAGGCGG TAAAAGCGAA GAAAGTTCCG GAATTTTAAA ACTGATAGAA ATGATTGTAA AACAGTCAAT CATAATGCGA GGTAGTGATA TTCATATTGA GCCTACGGAA AATAACTGCG TTGTCAGAAC AAGAATTGAT GGTATGCTTG CTGAAACATT TATATTTGAC AAAGATATTT ATCCGCCGTT GGTTTCACGT CTAAAACTTT TATCAAATAT GGATATAGCT GAGCGTAGAA AACCGCAAGA CGGTCGTTTT ACTATGATGA TAGGCGATAA AAAATATGAT TTTCGTATAT CTACATTGCC GATTATAAAT GGTGAATCAA CAGTTATGCG TATTTTGGAT CAATCAAAAG TTCTTATAAG CCTTGAAAAG CTTGGAATGC ATCCAAAAAG TTTTGAAAAA TTTAATAATG CAATGCATGC TCCATATGGC GTTATATTAG TTACTGGACC GACTGGTAGC GGTAAATCAA CTACACTTTA TGCGGCATTA AATGACGTAA AAAATATAGA CACTAAGATT ATTACGGTAG AAGATCCGGT CGAGTATCAA GTGACCCTTA TTCAACAAGT GCATGTAAAT GAAAAAGCAG GATTAACTTT TGCTGCAGCG CTTCGTTCTA TTTTGCGACA AGATCCGGAT ATCATAATGA TAGGTGAGAT TCGCGATCAG GAAACGCTTG AAATAGCGGT CCAAGCTGCT TTGACAGGTC ACTTGGTTTT TAGTACGCTT CACACTAATG ACGCAATTAG CGCAATTCCT AGAATGGTTG ATATGGGAAT TCAGCCGTAT TTAATCAGCG GTGCTTTAAT AGCCGTAGAA GCTCAAAGAC TTGTGCGTAA GCTTTGTCCG CATTGCAAAG AGCCTGCAAA TTTACCAAAG GCAATGTTGG AAGAATTAAA ACCGTATTTG CCTGAAAAAT ATCAATTTTA CAAAGCTGTA GGTTGCGATC AATGTGCGCA TACAGGATAT TCCGGACGTG AAATGATAAG TGAAATTTTA CCTATTAGCG ATAAAATGCA AAGTTTGATA GCAAATGGTG CCTCTAAAGA AGAGATGAAA GCTCTTGCGT TAGAAGAAGG TTTTATTGAT ATGTTCCATG ATGGTGTTAT AAGGGCTGCT CGTGGAGCTA CAAGTATTGA AGAAATTTAT AGGGTGGCAA AAAAATGA
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Protein sequence | MAKDSIEITI LKILIDHGIL NESLIPEIKE KMDIGLTLGE VLIGDNYVNQ EGFIALLAEL YRKKMTNLDE IYEKFSIDTK TFLPVLAKLA KLEYMNLDDI DIDYKLSDRA PTAQLKRYGV MPVKEDDLNT YVAFADPFNL DAQDRVQRIF NKKLVKIVVA DPKQITKYIS KIELSESIKG LVAEIRNELN SIGQAGGKSE ESSGILKLIE MIVKQSIIMR GSDIHIEPTE NNCVVRTRID GMLAETFIFD KDIYPPLVSR LKLLSNMDIA ERRKPQDGRF TMMIGDKKYD FRISTLPIIN GESTVMRILD QSKVLISLEK LGMHPKSFEK FNNAMHAPYG VILVTGPTGS GKSTTLYAAL NDVKNIDTKI ITVEDPVEYQ VTLIQQVHVN EKAGLTFAAA LRSILRQDPD IIMIGEIRDQ ETLEIAVQAA LTGHLVFSTL HTNDAISAIP RMVDMGIQPY LISGALIAVE AQRLVRKLCP HCKEPANLPK AMLEELKPYL PEKYQFYKAV GCDQCAHTGY SGREMISEIL PISDKMQSLI ANGASKEEMK ALALEEGFID MFHDGVIRAA RGATSIEEIY RVAKK
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