Gene CHAB381_1042 details

Gene Information

• Locus tag: CHAB381_1042
• Symbol: rpiB
• ID: 5409067
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 977659
• End bp: 978105
• Gene Length: 447 bp
• Protein Length: 148 aa
• Translation table: 11
• GC content: 35%
• IMG OID: 640870727
• Product: ribose 5-phosphate isomerase B
• Protein accession: YP_001406600
• Protein GI: 154149471
• COG category: [G] Carbohydrate transport and metabolism
• COG ID: [COG0698] Ribose 5-phosphate isomerase RpiB
• TIGRFAM ID: [TIGR00689] sugar-phosphate isomerases, RpiB/LacA/LacB family; [TIGR01120] ribose 5-phosphate isomerase B

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAATAG AAAAAATTTT TATAGCAAGC GATCACGCGG GATTTGATGC AAAGCAAATC 
GCCAAAAAAA CATTAAATCA AATGAATTTT GAAGTTATAG ATTTAGGCAC GAACGATTCG 
CAAAAAAGCG TTGATTATCC TGATTTTGCT TATGCTTTGA GTAAAGAAAT CGCAAAGGAT 
GAAAAAAATT ATGGAATTTT GATTTGCGGA ACCGGAATTG GAATCAGCAT AGCTGCAAAC 
AGAAATCCAA AAATTCGCTG CGCACTTTGT CACGATGCAC TTACTGCAAA ACTTGCAAGA 
GAACACAATG ACGCAAATAT TTTAGCTTTT GGCGGCAGAA TTTTAGGTAG CGCTGAAATA 
GAAAGCATTA TAAAAATATT TTTTAATACT GAGTTTTTAG GCGGCCGTCA CGCAAGAAGA 
ATAGCTAAAC TGGGAGAAAT AAAATGA 

 

Protein sequence

MQIEKIFIAS DHAGFDAKQI AKKTLNQMNF EVIDLGTNDS QKSVDYPDFA YALSKEIAKD 
EKNYGILICG TGIGISIAAN RNPKIRCALC HDALTAKLAR EHNDANILAF GGRILGSAEI 
ESIIKIFFNT EFLGGRHARR IAKLGEIK