| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_1009 |
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| Symbol | truD |
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| ID | 5409330 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 948636 |
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| End bp | 949733 |
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| Gene Length | 1098 bp |
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| Protein Length | 365 aa |
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| Translation table | 11 |
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| GC content | 33% |
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| IMG OID | 640870696 |
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| Product | tRNA pseudouridine synthase D |
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| Protein accession | YP_001406570 |
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| Protein GI | 154148223 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0585] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00094] tRNA pseudouridine synthase, TruD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGCAAATT TTTTATATAC ACTTTCACAC AGCCCGATTG ATGCATATTT TACGAAAAAT
TCACGCGATT TTATCGTGCG CGAAGTGCCG CTTTATGATT TTAGCGGAGA TGGCGAGCAT
TGCGTGATTT GCTTGCAAAA AAAAGATCTT ACCACTTTCG ATGCGCTTCA TATTTTAAGT
GAACATTTAG GAGTTAAAAT TAGAGATTTC GGCTACGCGG GTCTTAAAGA CAAAGATGGT
CTTACTTCGC AATTTATAAG TTTTCCGGCA AAATTTGTAG CGGACATTGA AAATTTTTCG
CACGAAAAAA TTAAAATTTT AAGCATAACA AAACATAAAA ATAAGTTAAA AATAGGACAT
TTAAAAGGAA ATAACTTTTT TATTCGTTTA AAAAAAGTTT CGCAAATTGA TGCACAAAAA
ATACAGGCGG CTTTGCAAAC TATCGCAAAT CAAGGTTTTG CAAACTATTT CGGTTATCAA
AGATTTGGAA AATTCAGCGA TAATTTCGAA CAGGGCGAGA AAATTTTAAA AGGAGAGAAA
AAGTTTAAAA ATCCTAAAAT GCGAAATTTT TTAATTTCCG CATTTCAAAG CAAACTTTTT
AATAAATATT TGGAAAAAAG AGTTGAAATT TCAAAAATGG CAGGCGAGTT TTCTGGCGCA
CAGCTGGCTA AAATTTATGA TTTACAAGAC GATGAAGTTT CTTCTATCAT TAATCAAAAG
CAGTTTTTTA AAATTTTAAA CGGCGACATT TTAGGACATT TTCCACACGG TAAATTTTTT
GTCTGCGAAA ATTTAAATGA TGAAGTTCAA AGATTTTTAA GACGCGAGAT TTCACCTAGC
GGACTTTTGC TCGGAAATAT CAAACTGAAA AGCCAAATGC TTTCTGCGCG TTTTGAAAAT
GAAATTTATG AAAAATGTTA CGCATATTTA CCGCAACTCA ACGGCACATT TCGCTATTTA
TGGAGTTTTA TAGAAAACGC AAACTGTATT TATGACGAAC AAAACGCGCA ACTAAACCTG
GAATTTTACC TTCCGAAAGG CTCATACGCA ACCGTGATTT TAGAAGAAAT TTTACACAAA
GAAATTAACG AAATTTAA
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| Protein sequence | MANFLYTLSH SPIDAYFTKN SRDFIVREVP LYDFSGDGEH CVICLQKKDL TTFDALHILS
EHLGVKIRDF GYAGLKDKDG LTSQFISFPA KFVADIENFS HEKIKILSIT KHKNKLKIGH
LKGNNFFIRL KKVSQIDAQK IQAALQTIAN QGFANYFGYQ RFGKFSDNFE QGEKILKGEK
KFKNPKMRNF LISAFQSKLF NKYLEKRVEI SKMAGEFSGA QLAKIYDLQD DEVSSIINQK
QFFKILNGDI LGHFPHGKFF VCENLNDEVQ RFLRREISPS GLLLGNIKLK SQMLSARFEN
EIYEKCYAYL PQLNGTFRYL WSFIENANCI YDEQNAQLNL EFYLPKGSYA TVILEEILHK
EINEI
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