Gene CHAB381_0977 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0977 
Symbol 
ID5409101 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp913557 
End bp914972 
Gene Length1416 bp 
Protein Length471 aa 
Translation table11 
GC content33% 
IMG OID640870664 
Productprotease do 
Protein accessionYP_001406538 
Protein GI154148022 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain 
TIGRFAM ID[TIGR02037] periplasmic serine protease, Do/DeqQ family 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA CAGTAATTTT TTCTATTTTT TTGGCTTCTG TCATGTTTGC AGGCAATATC 
GATTTTAACG AAGCCGACAA AAACGTCGAG AGGATAAATC CTCTAGTAAA TAGTGAAAAT
AAGATTATTT CATTTAATTC ATCAATTACA AATGCAAAAA AATCGGTCGT AAATATTGCG
ACTTCACAAA CCATAAAAGC GTCTCAAAAT CAAATTGATC CGTTTTTTAA CGATCCGTTT
TTTAACGATT TTTTTAAATT TAACTTCGGA ATTCCAAAAA CAGATAGAAA AGCTAAATCT
TTGGGATCAG GCGTAATTAT TTCAAATGAC GGATATATAG TTACAAACAA TCATGTCGTA
GAAAACGCCG ATGAAATTAT AGTAACTTTG AGTGAAAGCG ATAAAGAATT TAAGGCAAAA
CTTATCGGCA ACGATCCTAA AACAGATATT GCAATAATAA AAATAGACAA AAAGGATCTT
ACCGCAATAA AATTCGGTGA TAGCGGAGAA CTTCTTGAAG GCGATATGGT TTTTGCCATA
GGAAATCCGT TCGGCGTTGG CGAAACAATT ACACAAGGTA TAATTTCGGC TCTAAATAAA
AACAATATCG GTTTAAATCA ATATGAAAAT TTTATACAAA CCGATGCTTC TATAAATCCC
GGAAACTCAG GAGGAGCATT GGTAGATAGC CGTGGTGCTT TAATAGGAAT AAATTCCGCT
ATTTTAAGCA GCAGCGGTGG AAATAACGGT GTCGGATTTG CAATTCCTTC AAATATGGTA
AAAAATATCG CAAGCAAACT GATAAAAGAC GGCAAGATCG AACGCGGATA TATCGGCGTA
ATGATATCAA ATCTAAATGA AGACCAAAAA GAAATTTACA AAAATGAAGA AGGCGCACTT
ATAGCAAGCG TGGAAAAAAA TTCTCCTGCC GATAAAGCTG GACTTAAACG CGGCGATTTA
ATCGTTAAAA TAAACGACAA AAGCATAAAA AATGCGAATG AACTTAAAAA CATAATCGGC
TCAATGTCTC CAGGCGAAAC AATCGAAGTA CAATATGAAC GTGCAAAAGA TACGAAAACA
GCAAAAATCA AACTTGATAA TATGGATAGC AGCACACTTG CAGAAAACAC AGAATCAAAA
AGTTCAATAG AAGGCCTAAA ACTTTCAAAT CTTACAAATG AACTCAAACG TCAATATAAT
ATTCAAAGTG ATATAAAAGG CGTAATCATT ACAAATGTAG AAAAAGGCTC AAAAGCCGAA
GATTACGGTT TTGAACGCGG AGATATAATA ATGCAGATCG CTCAAAAAGA GATAAAAACC
ATAGCCGATA TAGATGAGGC GATTAAATCA AATAAAGGCA AAAAAATCGT TTGGGTTTTA
AGAAATGAAA TTCCGCTTGG AATAGTAATA AAATAA
 
Protein sequence
MKKTVIFSIF LASVMFAGNI DFNEADKNVE RINPLVNSEN KIISFNSSIT NAKKSVVNIA 
TSQTIKASQN QIDPFFNDPF FNDFFKFNFG IPKTDRKAKS LGSGVIISND GYIVTNNHVV
ENADEIIVTL SESDKEFKAK LIGNDPKTDI AIIKIDKKDL TAIKFGDSGE LLEGDMVFAI
GNPFGVGETI TQGIISALNK NNIGLNQYEN FIQTDASINP GNSGGALVDS RGALIGINSA
ILSSSGGNNG VGFAIPSNMV KNIASKLIKD GKIERGYIGV MISNLNEDQK EIYKNEEGAL
IASVEKNSPA DKAGLKRGDL IVKINDKSIK NANELKNIIG SMSPGETIEV QYERAKDTKT
AKIKLDNMDS STLAENTESK SSIEGLKLSN LTNELKRQYN IQSDIKGVII TNVEKGSKAE
DYGFERGDII MQIAQKEIKT IADIDEAIKS NKGKKIVWVL RNEIPLGIVI K