Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0977 |
Symbol | |
ID | 5409101 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 913557 |
End bp | 914972 |
Gene Length | 1416 bp |
Protein Length | 471 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640870664 |
Product | protease do |
Protein accession | YP_001406538 |
Protein GI | 154148022 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0265] Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain |
TIGRFAM ID | [TIGR02037] periplasmic serine protease, Do/DeqQ family |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAAA CAGTAATTTT TTCTATTTTT TTGGCTTCTG TCATGTTTGC AGGCAATATC GATTTTAACG AAGCCGACAA AAACGTCGAG AGGATAAATC CTCTAGTAAA TAGTGAAAAT AAGATTATTT CATTTAATTC ATCAATTACA AATGCAAAAA AATCGGTCGT AAATATTGCG ACTTCACAAA CCATAAAAGC GTCTCAAAAT CAAATTGATC CGTTTTTTAA CGATCCGTTT TTTAACGATT TTTTTAAATT TAACTTCGGA ATTCCAAAAA CAGATAGAAA AGCTAAATCT TTGGGATCAG GCGTAATTAT TTCAAATGAC GGATATATAG TTACAAACAA TCATGTCGTA GAAAACGCCG ATGAAATTAT AGTAACTTTG AGTGAAAGCG ATAAAGAATT TAAGGCAAAA CTTATCGGCA ACGATCCTAA AACAGATATT GCAATAATAA AAATAGACAA AAAGGATCTT ACCGCAATAA AATTCGGTGA TAGCGGAGAA CTTCTTGAAG GCGATATGGT TTTTGCCATA GGAAATCCGT TCGGCGTTGG CGAAACAATT ACACAAGGTA TAATTTCGGC TCTAAATAAA AACAATATCG GTTTAAATCA ATATGAAAAT TTTATACAAA CCGATGCTTC TATAAATCCC GGAAACTCAG GAGGAGCATT GGTAGATAGC CGTGGTGCTT TAATAGGAAT AAATTCCGCT ATTTTAAGCA GCAGCGGTGG AAATAACGGT GTCGGATTTG CAATTCCTTC AAATATGGTA AAAAATATCG CAAGCAAACT GATAAAAGAC GGCAAGATCG AACGCGGATA TATCGGCGTA ATGATATCAA ATCTAAATGA AGACCAAAAA GAAATTTACA AAAATGAAGA AGGCGCACTT ATAGCAAGCG TGGAAAAAAA TTCTCCTGCC GATAAAGCTG GACTTAAACG CGGCGATTTA ATCGTTAAAA TAAACGACAA AAGCATAAAA AATGCGAATG AACTTAAAAA CATAATCGGC TCAATGTCTC CAGGCGAAAC AATCGAAGTA CAATATGAAC GTGCAAAAGA TACGAAAACA GCAAAAATCA AACTTGATAA TATGGATAGC AGCACACTTG CAGAAAACAC AGAATCAAAA AGTTCAATAG AAGGCCTAAA ACTTTCAAAT CTTACAAATG AACTCAAACG TCAATATAAT ATTCAAAGTG ATATAAAAGG CGTAATCATT ACAAATGTAG AAAAAGGCTC AAAAGCCGAA GATTACGGTT TTGAACGCGG AGATATAATA ATGCAGATCG CTCAAAAAGA GATAAAAACC ATAGCCGATA TAGATGAGGC GATTAAATCA AATAAAGGCA AAAAAATCGT TTGGGTTTTA AGAAATGAAA TTCCGCTTGG AATAGTAATA AAATAA
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Protein sequence | MKKTVIFSIF LASVMFAGNI DFNEADKNVE RINPLVNSEN KIISFNSSIT NAKKSVVNIA TSQTIKASQN QIDPFFNDPF FNDFFKFNFG IPKTDRKAKS LGSGVIISND GYIVTNNHVV ENADEIIVTL SESDKEFKAK LIGNDPKTDI AIIKIDKKDL TAIKFGDSGE LLEGDMVFAI GNPFGVGETI TQGIISALNK NNIGLNQYEN FIQTDASINP GNSGGALVDS RGALIGINSA ILSSSGGNNG VGFAIPSNMV KNIASKLIKD GKIERGYIGV MISNLNEDQK EIYKNEEGAL IASVEKNSPA DKAGLKRGDL IVKINDKSIK NANELKNIIG SMSPGETIEV QYERAKDTKT AKIKLDNMDS STLAENTESK SSIEGLKLSN LTNELKRQYN IQSDIKGVII TNVEKGSKAE DYGFERGDII MQIAQKEIKT IADIDEAIKS NKGKKIVWVL RNEIPLGIVI K
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