| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0954 |
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| Symbol | |
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| ID | 5408072 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 889941 |
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| End bp | 892130 |
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| Gene Length | 2190 bp |
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| Protein Length | 729 aa |
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| Translation table | 11 |
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| GC content | 32% |
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| IMG OID | 640870641 |
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| Product | general glycosylation pathway protein |
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| Protein accession | YP_001406515 |
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| Protein GI | 154149323 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1287] Uncharacterized membrane protein, required for N-linked glycosylation |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.16886 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAGGATC TTAAAAATTC AAAATTTAAA ATTGATTTTC AAAGATTTAA ATTTATAAAA
TTTATAACTC ATTTCGAGCT TTTGAGCAAG CTTAGCTGGA TGATCATAAT AGCCTTTTTG
TTTAGTTTTT CAGTTAGACT TTATTGGGTG GTTTGGGCGA ACGATTATCC GGAGCTTTTT
TGGAATGATG ATATTATGAT AAATACAAAT GACGGTTATG CCTTTGCTGA GGGTGCAAGA
GACCGCTTGG CAGGTTTTCA TCAACCAAAC GATCTTAGTT ATATAAATTT TCCGCTTTCC
ATAATAACGG CTTGGCTGGT TAAAATTTTG CCGTTCAGTT TTGAACGTAT TATTTTATAT
ATGAGCGCAT TTTTCAGTTC TTTGATTGTA ATTCCGATAC TTCTTATTTC ATCCGAGTTT
CGCTGCATTA GAGCGGGTTT TATCGGTTCT TTAATAGCTT GCGTGACAAA CAGTTACTAT
AACCGCACAA TGGTCGGATA TTATGATACC GATATGTTAA ACATCGTTTT AGCGATGTTT
ATTTTGTGGG TACTTATTAG AAGCACTATA AAAAATGATA AGTTTTGTTT TATCTATATC
GGTTTTTTTG TTACTTTTTA CAATTGGTGG TATCCATCAA GCTTTTCGCT AAATTCGGCT
ATGCTTGGCG CTTTTTTGAT TTATACGATT GTTTTTCAAA GAAAGCGTGT TTTTAATTTT
CAAGTAATGA TTTTAATGCT TGCGGCGCTA ATTTCGATTC CGCTTTATCT TAAAATTTTA
CTTTTGATTG CTATTACTTT TGCGTTTTGG AAAAAATCAG ATTTTTTTGC AGATACAAAG
CATTTAACAA TAACGGGTGG AGCAGTTTTG CTTCTTTTTA TATTAAACGG CGGACTTTCG
CCTATTTTGT TTCAACTTAA ATTTTATATT TTTCGCGGTT TTGCTGATCA CGCCGATATT
TTAAGCAATG CCGATAAAAT TGTTTATAAA TTTTATAATG TTAATCAAAC TATACAGGAA
TCAGGTTTTG TAAGTCCTGA AATTTTTATG CAAAGAATAA GCTCAAATGT AATTGTTTTT
ATGCTTTCAT TGGCCGGTTT TGTGCTTTTG TGTTTTAAGC ACAAAGAATT TTTGCTTTCT
TTGCCTGTTT TGCTTCTTGG CTTTATGGCG ATAAAAGCGG GACTTAGATT TACAATTTAT
TCTGTTGGCG TTATGGGGCT TGGTTTCGGA TATTTAGCAT ATTATTTAAT CAAAATTTTG
CAGCTTCCAA AGTATATGCA ACGAATTTTG CTTTTAATTA TTACGATTCT CGCGCTTTAT
CCGTCGATAA TTCATATTAA AATGTATCTT TCCGCAAGCG TTTTTTATAG AAGCGAAGTT
GAAATTTTAG ATAAATATAA AAATATCGCG GATCGTGAAG ATTACACGCT TTCATGGTGG
GATTACGGCT ATCCGATTCG TTATTACAGT GATACAAAAA CATTAATTGA CGGTGGAAAA
CACCTTGGAA ACGATAATTT TCCTGTCAGT TTCGCTCTTT TTAAAGATCA GACAAGCGCT
GCAAATATGG CGCGCATAGA TGTAGAGTTT ACGGAGAGAA ATTTTTATGA AAAATTTGAC
GATAAATACA AACAAATTTT ACTGGAATAT AACTATAAAC CCGAACAAAT GAATGAATTT
TTGCTCTCTT TACGCTCAAA AAATTTGCCG CTTCCAAGAA AAACGCGCGA TGTTTATTTT
TATTTGCCCG ATCGTATGCT AAATATTTTT TCGACCGTTA CAAAGTTTTC AAATCTTGAC
ATAATGGACG GAAAAGAATT TCCTGATAGA ACTTATATAG TAAGCGATAA TTATAAAGTC
AGCAATTCAG GTGTTGAAAT AGGCAACGGA ATTCGCATAA ATCCTGATTT TATGAGTTTA
AATTTTGAAG GTCAAAAACT TCCGATAAAT ACGCTATATG TAACTAATTA TGACGAAAAA
GGAAAACTGA AAGTGGCGAC TAATACAATA GACAGCTCAT CGCCGCTATT TATAATCGTT
ATGAAAGATT ACGGCAGGAT TTTAATACTT GATGAAACAA TGCTGAAATC GACATATATT
CAACTTTATG TACTTGAAAA TTATGACAGA GATCTTTATG AACCTGTGAT TTTATCACCG
GTGGCTAAAA TTTACAGATT AAAAAAGTAA
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| Protein sequence | MQDLKNSKFK IDFQRFKFIK FITHFELLSK LSWMIIIAFL FSFSVRLYWV VWANDYPELF
WNDDIMINTN DGYAFAEGAR DRLAGFHQPN DLSYINFPLS IITAWLVKIL PFSFERIILY
MSAFFSSLIV IPILLISSEF RCIRAGFIGS LIACVTNSYY NRTMVGYYDT DMLNIVLAMF
ILWVLIRSTI KNDKFCFIYI GFFVTFYNWW YPSSFSLNSA MLGAFLIYTI VFQRKRVFNF
QVMILMLAAL ISIPLYLKIL LLIAITFAFW KKSDFFADTK HLTITGGAVL LLFILNGGLS
PILFQLKFYI FRGFADHADI LSNADKIVYK FYNVNQTIQE SGFVSPEIFM QRISSNVIVF
MLSLAGFVLL CFKHKEFLLS LPVLLLGFMA IKAGLRFTIY SVGVMGLGFG YLAYYLIKIL
QLPKYMQRIL LLIITILALY PSIIHIKMYL SASVFYRSEV EILDKYKNIA DREDYTLSWW
DYGYPIRYYS DTKTLIDGGK HLGNDNFPVS FALFKDQTSA ANMARIDVEF TERNFYEKFD
DKYKQILLEY NYKPEQMNEF LLSLRSKNLP LPRKTRDVYF YLPDRMLNIF STVTKFSNLD
IMDGKEFPDR TYIVSDNYKV SNSGVEIGNG IRINPDFMSL NFEGQKLPIN TLYVTNYDEK
GKLKVATNTI DSSSPLFIIV MKDYGRILIL DETMLKSTYI QLYVLENYDR DLYEPVILSP
VAKIYRLKK
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