| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0939 |
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| Symbol | |
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| ID | 5407981 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 874429 |
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| End bp | 875619 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 37% |
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| IMG OID | 640870626 |
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| Product | lipoprotein release system transmembrane protein |
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| Protein accession | YP_001406500 |
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| Protein GI | 154148848 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
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| TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.866637 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGGTTAAAT ATCTGCTTTT TAAATATCTG CGTTTTGATA AAACTCAGCC GTTTATAACT
CTTTCGGCTA TTTTGGCATT TATAGGCGTA AGTGTCGGAC TTATGGTATT GATAGTCGCT
ATGGCGATTA TGAACGGCTT TGATAAAGAA TTTGAGCGTA AACTTTTTAC AATGAATTAT
CCAATAACGA TTTTCAGTCC GTTTCGCGGT GCAATTACCG CAGACGAAGT GGATAATTTA
AAAACTATGT TTCCACAAAT GAAATTCAGC CCATACATAA CTTCGCAAGT CATCGTAAAA
AGCGGCGAAA AACTGGAAGG CGGACTTATT TTCGGTGTAA ATATCGAAGA TGAAAAGCAA
ATCAACTCGG TCGTAAAAGA CGGAATAAAA GACGCAAATC TGACAGACTT TGGAATTTTA
CTTGGTAGCG GGCTGACAGG CGAATTAAAC ACTGCAAAAA ATGATAAAGT CACTCTTATT
TTTACAAAAA ACGATCCGAG CGGATTTTCT CTCATACCGA AAATGAAACG CTTTGATGTG
CGGGCAGATT TTACTTCAGG ACTTATTGCA TATGATAAAG TTTATATGTA TGCAAATGCG
GACGATTTGG CAAAAATTTT AGGTTATGAA AGCGGCGATT TCGACGGTGT TCATATTTAT
TCCGACGATC CGTTTAATGA TATAAAAAAA ATCAACGAAA TTTTGCCGCA AACTGCTAGA
GCTATTGGTT GGTGGGAACA AAACGGTAAT TTTTTCTCGG CTCTTGCGCT TGAAAAACGT
GCACTTTTTA TCGTTTTAAT GCTTATAATT TTAGTTGCCA GCTTGAATAT CGTAAGTTCG
CTTTTGATGA CTGTGATGAA TCGCCGTCAG GAAATCGCAC TTTTACTCAG TCTTGGTGCA
AGTAAAAAAG AGGTAAAGCA AACTTTTTTT AGACTTGGCG CGGTAATAGG CGGTAGTGGA
ATAATTTTCG GGCTTATTTT AGGACTTTTT GGAGTTTGGC TGCTTGGAAA TTTTGACATC
GTAAAACTTC CTGCTGATGT ATATGGAAGC TCAAAACTGC CTATGGAACT ATCTTTTAGT
GATTTAGCGA TGATTTTAGG TGGCGCGATT GTGATTGTGC TTATATCGTC ATTTTATCCG
GCAAAAAAAG CAACGCAAGT TGATGTTCTT GATACTTTGC GAAATGAGTA G
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| Protein sequence | MVKYLLFKYL RFDKTQPFIT LSAILAFIGV SVGLMVLIVA MAIMNGFDKE FERKLFTMNY
PITIFSPFRG AITADEVDNL KTMFPQMKFS PYITSQVIVK SGEKLEGGLI FGVNIEDEKQ
INSVVKDGIK DANLTDFGIL LGSGLTGELN TAKNDKVTLI FTKNDPSGFS LIPKMKRFDV
RADFTSGLIA YDKVYMYANA DDLAKILGYE SGDFDGVHIY SDDPFNDIKK INEILPQTAR
AIGWWEQNGN FFSALALEKR ALFIVLMLII LVASLNIVSS LLMTVMNRRQ EIALLLSLGA
SKKEVKQTFF RLGAVIGGSG IIFGLILGLF GVWLLGNFDI VKLPADVYGS SKLPMELSFS
DLAMILGGAI VIVLISSFYP AKKATQVDVL DTLRNE
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