Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0938 |
Symbol | secA |
ID | 5409364 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 871570 |
End bp | 874224 |
Gene Length | 2655 bp |
Protein Length | 884 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640870625 |
Product | preprotein translocase subunit SecA |
Protein accession | YP_001406499 |
Protein GI | 154147932 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAAA AGGCTTTAGG AAAAATTTTC GGCACGAAAA ATGACAGAAT TGTAAAAGCA TACGCAAAGC GAGTAGCAAA AATAAATGCT TTGGAACCTA CTTATGAAAA ACTTAGCGAC GATGAATTAA AAGATAAATT TTCAAAACTT AAAGAACAGG TTTTAGCACA AAAACTTACA CTTGATGATG CACTTTATGA TGTTTTCGCG ATTGTCAGAG AGGCTAGTAA AAGAGTTTTA AAAATGCGCC ATTTTGACGT TCAACTAATA GGCGGAATGG TGCTTCATGA CGGAAACATA GCCGAAATGA AAACAGGCGA AGGAAAAACT TTAGTTGCAA CTTTACCCGT TGTTTTAAAT GCAATGAACA AAAAAGGAGT TCATGTCGTA ACAGTAAATG ATTATCTTGC TAAGCGTGAT GCCGCCGATA TGGGCGTTTT GTATAATTTT TTGGGATTTT CAGTCGGCGT AATTTTAGGC GGAAATTATG ATGATAAAGC AAGAAAAGAA GCTTATAATT GTGATATAAC TTACGGCACA AACAATGAAT TCGGCTTTGA TTATCTGCGC GATAATATGA AATTTAGAAA AGAAGACAAG GTTCAAAGAG GACACAATTT CGTAATTGTC GATGAAGTGG ACAGTATTTT AATAGATGAA GCAAGAACTC CATTAATCAT CAGCGGTCCT ACAAATCGTA CGCTTGATGG ATATATAAAA GCAAACGAAG TTGCAAAACA AATGAAATGC GGAGAGCCGG CAGATCCGCT TGATAAAAAT TCAAAAGCAA CAGGTGATTT TACACTTGAT GAGAAAAATC GCGCTGTAAT GATAACAGAA GCCGGTATAA GCAAAGCTGA AAAACTTTTT GGCGTAGATA ATCTTTACAG TCTTGACAAT GCCGTTTTAA GTCACTATCT TGATCAGGCC CTAAAAGCAA ATTATCTTTT CGAAAAAGAT GTGCATTACG TAGTAAAAGA CGGACAAGTG GTAATCGTGG ATGAATTTAC CGGTCGTCTT AGCGAAGGAA GACGTTTTAG TGAAGGACTT CATCAAGCGC TTGAAGCGAA AGAAGGAGTA AAAATTCAAG AAGAGAGTCA AACTTTGGCT GATATTACAT TTCAAAACTA CTTCCGCCTT TATGACAAAC TTTCAGGAAT GACAGGAACA GCTCAAACCG AAGCAACAGA ATTTTCTCAA ATTTATAAAT TGGAAGTTAT TTCTATTCCT ACAAATTTAC CTGTCAAAAG AATCGATCAA AACGATCTTA TTTATAAAAC CGAAAAAGAA AAATTTGATG CCGTAATAGC TCAAATCAAG TATTTACATG CAAAAGGACA ACCTGTACTT GTAGGAACCG CTTCAATAGA AAAAAGTGAA AAATTACATG AACTTTTGAC AAAAGAGAAG ATTAACCACT CTGTTTTAAA TGCCAAAAAT CACGAAAAAG AGGCGCAAAT AATAGCAAAT GCCGGAGATA AAGGAGCTGT GACCATTGCT ACAAATATGG CAGGACGTGG TGTTGATATA AAAATAAATG ACGAAGTTCG CGCACTTGGA GGACTTTATA TACTTGGAAC GGAGCGCCAC GAAAGCAGAC GAATAGACAA TCAGCTTCGC GGTCGTTCGG GCCGTCAGGG AGATCCTGGA GAAAGCCGTT TTTATCTTAG TTTGGAAGAT AATTTACTTA GAATTTTCGG AAGTGATAAA ATTAAGCACA TAATGGAAAG GCTTGGTCTT AAAGAAGGCG AGAGTATAGA ATCAAGGCTT GTAACAAAAG CCGTCGAAAA TGCACAAAAA AAGGTGGAAA GTCTGCATTT TGAATCAAGA AAATATATCC TTGAATATGA TGATGTCGCA AACGAACAAA GAAAAGTAAT TTATAGATAC CGTAACGAAC TTCTTGAAGC TGATTTTGAT CTGCATGATA AAATCATTTC AAATCGTGAA GATTATATTG CAAATGTACT TGATCGTCTT GAAATTTTTG ATGGGGATAG CAAAGAAAAT TTTGACATAC AAAAAATAAC TTCTATTATA AAATCAGAAA CTACTGAAAT TTTAGATGAA AATAAGTTAT CAAAAGCTGA AGATTACAAA GAATTAAAAG AAGAAATTAT AAAAGAACTT AGAGATTTTT ATGAAGAAAA AATGGCTCCT GTCGATAATG AGCAACGAAA ATCAATCGAA AAAATGCTTT ATCTTCAAAT AGTGGATCGG GACTGGCGCG AACATTTATA CCAAATGGAT ATCCTAAAAA CCGGCATCGG TCTTCGAGGA TACAATCACA GAGATCCGCT AACAGAATAT AAAAAGGAAA GTTATAATCT TTTTGTAGAG CTCGTAATGC GCCTAAAAAG CGACAGCATT CGCACATTGC ACTCAATAAG ATTCAAAACA CAGGAAGAAA TTGAAGCTGA AAGACGTGCA ATTGCCGAAC TTCAAGCAAA ATTACAAGAA GAGGAGCAAA AAAAATTAAA AATGAGCGGT GCGGATAAAG GCGGAGAAGA TTTGGAAGAA ACAAAAAATG TTCCTTATCG TGCCCCCAAA AAGATAGGCA GAAATGAACC TTGCCCTTGC GGAAGTGGCA AAAAATACAA AGATTGCCAT GGTAAAAGCG GTCCAAAAAA AGGTCTTTTT GCAAATAATG ATTGA
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Protein sequence | MIQKALGKIF GTKNDRIVKA YAKRVAKINA LEPTYEKLSD DELKDKFSKL KEQVLAQKLT LDDALYDVFA IVREASKRVL KMRHFDVQLI GGMVLHDGNI AEMKTGEGKT LVATLPVVLN AMNKKGVHVV TVNDYLAKRD AADMGVLYNF LGFSVGVILG GNYDDKARKE AYNCDITYGT NNEFGFDYLR DNMKFRKEDK VQRGHNFVIV DEVDSILIDE ARTPLIISGP TNRTLDGYIK ANEVAKQMKC GEPADPLDKN SKATGDFTLD EKNRAVMITE AGISKAEKLF GVDNLYSLDN AVLSHYLDQA LKANYLFEKD VHYVVKDGQV VIVDEFTGRL SEGRRFSEGL HQALEAKEGV KIQEESQTLA DITFQNYFRL YDKLSGMTGT AQTEATEFSQ IYKLEVISIP TNLPVKRIDQ NDLIYKTEKE KFDAVIAQIK YLHAKGQPVL VGTASIEKSE KLHELLTKEK INHSVLNAKN HEKEAQIIAN AGDKGAVTIA TNMAGRGVDI KINDEVRALG GLYILGTERH ESRRIDNQLR GRSGRQGDPG ESRFYLSLED NLLRIFGSDK IKHIMERLGL KEGESIESRL VTKAVENAQK KVESLHFESR KYILEYDDVA NEQRKVIYRY RNELLEADFD LHDKIISNRE DYIANVLDRL EIFDGDSKEN FDIQKITSII KSETTEILDE NKLSKAEDYK ELKEEIIKEL RDFYEEKMAP VDNEQRKSIE KMLYLQIVDR DWREHLYQMD ILKTGIGLRG YNHRDPLTEY KKESYNLFVE LVMRLKSDSI RTLHSIRFKT QEEIEAERRA IAELQAKLQE EEQKKLKMSG ADKGGEDLEE TKNVPYRAPK KIGRNEPCPC GSGKKYKDCH GKSGPKKGLF ANND
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