| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0895 |
|---|
| Symbol | |
|---|
| ID | 5409502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 832369 |
|---|
| End bp | 833262 |
|---|
| Gene Length | 894 bp |
|---|
| Protein Length | 297 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640870582 |
|---|
| Product | bifunctional short chain isoprenyl diphosphate synthase |
|---|
| Protein accession | YP_001406457 |
|---|
| Protein GI | 154148638 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.224244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAAA TCGATAATCT AATGCATAAT TTTATCGCAG AGTGTGGATA TGAACCAGCT
ATGCAGATGT TTTCTCAAAT AAAATCAGGT AAAAAACTTC GCTCTAAACT TTTATTGAAA
ATCGCAGGCG AAAGTGAAAT TTCACTTAAA CTTTGCGCGA TTGTGGAGCT GATTCATGCT
GCAAGTTTGC TTCACGACGA CGTTATCGAC GAAAGCGACA TAAGACGTGG AAATCCAAGT
ATAAATGCCG TTTTTGGCAG TAAAAATGCT GTAATGCTCG GCGATATTTT TTACAGTAAA
GCTTTTTTTG AGCTCTGTTC GTTTAACGAT TTTATATCCA AAACTATTTC AAACGCCGTT
TTTAAGTTAA GTATCGGCGA GCTTATGGAT GTAAAAATGA GCGAAAATTT TAATAAAAAC
CGCGAAAATT ATCTTACGAT GATTTATTAT AAAACTGCCG GTTTAATAGA ATCGGTTGCA
AAAATCGGCG CTTTTTTGGC AAATTCGGAT TGTGAAAAGT TTGCAGAATA CGGCAAAAAT
TTAGGACTTG CTTTTCAAAT AATTGATGAT ATTTTAGACA TAACTCAAGA TAGCAAAAAG
CTTGGAAAAC CGGCACTTAA TGATTTTAAA GATGGTAAAA CAACGCTTCC TTATATTTAT
CTTTACGAAA AACTTCCATT AAATGAACGC GAAATACTGC AAAGTTATTT TAAAAAAGAG
CTAAACGACG AACAGAGCGC ATGGATAAAA GATAAATTTC AAGAATTTAA AATAATTGAA
TTTTGTATAG ATGAAGCTAA AAATTTCGGT AAAAAAGCGG TTGAGGCTGT TGAAGAATTT
AATAACAAAG AACTTATAAA AATCGCTGAA AATATGATAA ATAGGGAATT TTAA
|
|---|
| Protein sequence | MDKIDNLMHN FIAECGYEPA MQMFSQIKSG KKLRSKLLLK IAGESEISLK LCAIVELIHA
ASLLHDDVID ESDIRRGNPS INAVFGSKNA VMLGDIFYSK AFFELCSFND FISKTISNAV
FKLSIGELMD VKMSENFNKN RENYLTMIYY KTAGLIESVA KIGAFLANSD CEKFAEYGKN
LGLAFQIIDD ILDITQDSKK LGKPALNDFK DGKTTLPYIY LYEKLPLNER EILQSYFKKE
LNDEQSAWIK DKFQEFKIIE FCIDEAKNFG KKAVEAVEEF NNKELIKIAE NMINREF
|
|---|
| |