| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0853 |
|---|
| Symbol | |
|---|
| ID | 5409082 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 791938 |
|---|
| End bp | 792807 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640870542 |
|---|
| Product | fumarylacetoacetate hydrolase family protein |
|---|
| Protein accession | YP_001406417 |
|---|
| Protein GI | 154147943 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0179] 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.432742 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACTGA TAACTTATAA AAACGGCAAA AATCGTTCTT TAGGAGTTTT AGGATGTGAC
GACACGGTTT TTGATTTTAG TTTGGCGGGA TTAAATTTTG CCGATATGCA TGAATTTATC
GTCAAACATA AAAAAAGCGA TTTAAAAAAA TTGAAAAAAT TCTCCAAAAA AAGCGGCGGA
TTGAAGTTGA AAAACAGCAG TAAATGTCCA TCTATCACGC CAAGACAAGA TGTCATTTGC
TTGGGAATAA ATTATTTGGA GCACGCAATT GAATCATATA AATTTAAAAA CATTAAATTT
GACGGAAAGC GCGAATATGC CGTTTATTTT AGCAAACGCG TAAATGAAGC GACAGGCGAT
TTCGGCAAGA TTGAACCACA TTTTGATTTG ACGCAAAAGC TTGATTATGA AGCTGAACTT
GCCGTAATTA TCGGCAAAGA TGCAAAAAAC GTAAGTGCCG ATGAAGCTGA AAATTACATT
TTCGGTTACA CTATTTTAAA TGATTTTTCT GCAAGAGATT TACAAAACAA TCACAAACAA
TGGTATTTCG GCAAAAGCCT TGATACATTT ACGGCAATCG GCCCTTGCAT AGTAACATCA
GATGAAATAG ATACTGAAAA TTTAGTTATA AAATGCTTTG TAAACGGCGA ACTTCGCCAA
AATTCAAATA CTTCAAATAT GATTTTTGAT AAAAATTTTG TCATCTCTGA GCTTAGTGCA
GGAATTACTT TAAAAGCTGG AAGCGTTATT TCTATGGGGA CGCCAAGTGG TGTCGGAATG
GGTTTTACAC CGCCAAAATT CTTAAAATCC GGTGATAAAA TCGAATGTGA AATAGAAAAT
ATCGGAAAAT TAACAAATTT TATAAGGTAG
|
|---|
| Protein sequence | MKLITYKNGK NRSLGVLGCD DTVFDFSLAG LNFADMHEFI VKHKKSDLKK LKKFSKKSGG
LKLKNSSKCP SITPRQDVIC LGINYLEHAI ESYKFKNIKF DGKREYAVYF SKRVNEATGD
FGKIEPHFDL TQKLDYEAEL AVIIGKDAKN VSADEAENYI FGYTILNDFS ARDLQNNHKQ
WYFGKSLDTF TAIGPCIVTS DEIDTENLVI KCFVNGELRQ NSNTSNMIFD KNFVISELSA
GITLKAGSVI SMGTPSGVGM GFTPPKFLKS GDKIECEIEN IGKLTNFIR
|
|---|
| |