Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0851 |
Symbol | rarD |
ID | 5409241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 789592 |
End bp | 790470 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640870540 |
Product | RarD protein |
Protein accession | YP_001406415 |
Protein GI | 154148183 |
COG category | [R] General function prediction only |
COG ID | [COG2962] Predicted permeases |
TIGRFAM ID | [TIGR00688] rarD protein |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0193705 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAAAAA ATCCGAACAC ATTGGCTCTA ATTACCGGTA TAGCTACATT TATGATGTGG GGACTTTTTC CGATTTATTT TAAATTACTT GAAAATGTCC CTGCTATTGA AGTTTTAGCG CACCGCGTAG TTTGGTCGTT ATTATTTTTA TTTATGATAA TTGCATATAG GAAAAGAATT AAAAATATTA TTCGCTATAC CGGCAATAAA AAACTTATGA GAGCTCTTTT TTTAACAGGG GTATTAATTG CTTCAAACTG GGGAATTTAT ATTTATGCTG TAAGCACAGA TCGAATACTT TATGCAAGCC TTGGTTATCT TATAAATCCG TTGTTTTCAA TACTTTTGGG AGCTATATTT TTAAAAGAAA AACTTAGCAG ACCTACTAAA ATTTCAATTT GTTTAGTCGT AGCGGCAATA GCAAATGAGA TGTATGCACT TGGAGAAATT CCGTTTATTT CATTGCTTTT ACCTGGAACT TTCGCAATTT ACGGACTTTT AAAAAAACAA ATTCAAATCG CTGCCATAGA CGGACTTTTT TTTGAAACTA TGCTGATTTT TCCACTTGCA ATTATTTATC TTTCATTCTT GGGAATTAGC GGCAACGGCG CGTTCAGCTT CTCCAAAACA GGTTTTCTTT TGGCTTTTAG CGGTATAGTT ACCGTTTTAC CGCTTATCAC ATTTAACTTT GCTGCTGTGC ATTTAAAATT GCAAACAATC GGTTTTTTAC AATATATCAG CCCTATAATT GCGGTTTTGC TTGCGGTTTT TGTTTATGGA GAACACCTTG AAATGCATAA AATTATAAGT TTCGCCATTA TTTTAGCCGG TCTTGCGATT GTCAGTTTAA GCGGAATTTT AAGGAGAAAA GATGATTAA
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Protein sequence | MQKNPNTLAL ITGIATFMMW GLFPIYFKLL ENVPAIEVLA HRVVWSLLFL FMIIAYRKRI KNIIRYTGNK KLMRALFLTG VLIASNWGIY IYAVSTDRIL YASLGYLINP LFSILLGAIF LKEKLSRPTK ISICLVVAAI ANEMYALGEI PFISLLLPGT FAIYGLLKKQ IQIAAIDGLF FETMLIFPLA IIYLSFLGIS GNGAFSFSKT GFLLAFSGIV TVLPLITFNF AAVHLKLQTI GFLQYISPII AVLLAVFVYG EHLEMHKIIS FAIILAGLAI VSLSGILRRK DD
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