Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0848 |
Symbol | |
ID | 5408638 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 785003 |
End bp | 786262 |
Gene Length | 1260 bp |
Protein Length | 419 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640870537 |
Product | carboxy--processing protease (C-terminal-processing protease) |
Protein accession | YP_001406412 |
Protein GI | 154149250 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0793] Periplasmic protease |
TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0053756 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAAAA AATTTCTTAT TATTTTTACA ATTTTTTGCG TATTCGCTAA TGTATTAAAT GCAAAAGACA GCGAAAAAAG TAGACTTGAG GCACTTGCAA AATTAACCAA AACAATGGCA ATAGTTGAAA ATAACTATGT TGATGAACTG AGTTTTTCTC AAATCGTAGA TAAAGCCATA AGCGGGCTTA TGAGTAATCT TGACGCACAT TCTAGTTTCA TGGATGAACA AGCTTTTAAT GACACCAAAA TTCAAACTGA AGGTGAATTC GGCGGACTTG GAATAACAGT CGGAATGAAA GACGGCGCAT TAACAGTAAT CGCACCGATT GAAGGCACAC CTGCCGATAA AGCCGGACTT AAAGCAAATG ACGTAATTTT AAGAATTGAT AATAACGCCA CTTTTGGAAT TTCAATAGAT GAAGCCGTTA AAAAAATGCG CGGCAAACCA AAAACTTCAA TAAACTTGAC AATCGTTCGA AAAGGCGAAA TGAAGCCATT TGATGTAAAA ATAGTCCGCG ATATGATAAA AGTGGAATCC GTATATGCTA AAATGATTGA AAAAGATGAT ATATTATATC TTAGAGTTAC AAATTTTGAC CAACATGTAA CGAATGACGC CAAAAAATTC ATACAGGAAA ATGCAAAAGC AAAAGGCATA ATTTTGGATC TTAGAAATAA TCCTGGCGGA CTTTTGGAGC AAGCTATCGG TCTTGCAAAT CTATTTATAG GAAAAGGCAC AATCGTATCT CAAAAAGGTC GAAATAAAAA TGAAAATATA TCTTACGAAG CGGATCCTAA GAAAAAAATT ACAAACTTGC CTTTGGCTGT TTTGATAAAC TCAGGAAGTG CAAGTGCAAG TGAAATCGTA AGCGGAGCTT TGCAAGATAC TAAAAGAGGT ATCATTATCG GAGAAAATAG CTTTGGAAAA GGCAGCGTGC AAGTAATTTT GCCTATTGAA GACAAAGAGG CTCTTCGCCT GACAATTGCA AAATACTATT TGCCAAGTGG TAGAACTATA CAAGCTGTCG GTGTCGCTCC GGATTTAGTA GTATTTCCCG GAAAAGTTCC TGCCGATCAA AATGAATTTT CAATAAAAGA AGCCGATCTT AAAAAACATT TGGAGGGCGA ACTTGCCAAA ATAGAACCGG TTAAATCTGA TAGTAAAAAT GATGATAAAA TAATAACTCA AAAACAAGTA AATGATGATA TACAATTAAA AACAGCTATT GATACAATAA AGGTTTTAAA TATACATTAA
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Protein sequence | MKKKFLIIFT IFCVFANVLN AKDSEKSRLE ALAKLTKTMA IVENNYVDEL SFSQIVDKAI SGLMSNLDAH SSFMDEQAFN DTKIQTEGEF GGLGITVGMK DGALTVIAPI EGTPADKAGL KANDVILRID NNATFGISID EAVKKMRGKP KTSINLTIVR KGEMKPFDVK IVRDMIKVES VYAKMIEKDD ILYLRVTNFD QHVTNDAKKF IQENAKAKGI ILDLRNNPGG LLEQAIGLAN LFIGKGTIVS QKGRNKNENI SYEADPKKKI TNLPLAVLIN SGSASASEIV SGALQDTKRG IIIGENSFGK GSVQVILPIE DKEALRLTIA KYYLPSGRTI QAVGVAPDLV VFPGKVPADQ NEFSIKEADL KKHLEGELAK IEPVKSDSKN DDKIITQKQV NDDIQLKTAI DTIKVLNIH
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