Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0781 |
Symbol | |
ID | 5408258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 723448 |
End bp | 724380 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640870477 |
Product | polysaccharide biosynthesis protein |
Protein accession | YP_001406355 |
Protein GI | 154148480 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3298] Predicted 3'-5' exonuclease related to the exonuclease domain of PolB |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.0522762 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAACT ATATTTGCGT TTTTGATTGC GAAACAATTC CTGATGCCGA TGTTTTGGCT GAAATTTTGA CGGACGATCA AAAAAGCGAA TGCTACGATG AGGTTTTTTA TGATGAAAAA TGTGAAATTT TAGATGAAAA AGAGCTTTCA AAACTTACAA AAACAAATAA AAGCAAGTTA AAAAGCGAAA AAAAATTAAA TCATAAAAAA ATTTCGCTTG CCGCTCAAAA ATTACAAAAA GAAAAAACAG GAAGCGAATT TCTACCGATT TGTTTTCATA AAATTGTCTG TATAAGTGCA GTTTTAGCTG ATGAATTCGG CAAATTTTTA AAAGTTGAAA CGCTTGAATA CGGCAAAAGT GAAAAAGAGC AAATCGAGTT TTTTCTAAAT ATGATTGAAA AGCACAATCC GCGCCTTATA AGTTATAACG GACGCGGCTT TGACCTGCCG ATGATTATGC TTAGAGCAAT GCGTTATAAT CTTACTTGCC ATGCATATTT TGAAACGGCA AACGGTGAAC TTAATAAAAA TAAATGGGAG AATTATCGCT ACCGATACAA CGAGCGATTT AATATGGATC TGCTTGATTT TGTAAATGAT TTCGGTTCTG CAAGAGGCGG ATTAAATCTT GATAATATAT GCAAAACTTT AGGACTTCCA GGCAAATACG ACGTTCATGG AGATCAGGTT TTGGAGCTTT TTTATGATAA CAAATTGGAC AAAATCAGCG AATATTGCCA AAGCGATGTG TTAAATACAT ATTTGCTTTT TATAAAAACA GAGCTTTTGC GCGGAAATTT AATTTTATCC GATTATGCCG ATTGTATTTC AATTATGAAA AAATATTTAT GTGAAAATTG TGAGCAAATG GGTTATTTCA AGCCGTTTAA TGATTTTTTG GAAAAGGAGC TTATAAATTT TGAAAATTTA TAA
|
Protein sequence | MKNYICVFDC ETIPDADVLA EILTDDQKSE CYDEVFYDEK CEILDEKELS KLTKTNKSKL KSEKKLNHKK ISLAAQKLQK EKTGSEFLPI CFHKIVCISA VLADEFGKFL KVETLEYGKS EKEQIEFFLN MIEKHNPRLI SYNGRGFDLP MIMLRAMRYN LTCHAYFETA NGELNKNKWE NYRYRYNERF NMDLLDFVND FGSARGGLNL DNICKTLGLP GKYDVHGDQV LELFYDNKLD KISEYCQSDV LNTYLLFIKT ELLRGNLILS DYADCISIMK KYLCENCEQM GYFKPFNDFL EKELINFENL
|
| |