Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0774 |
Symbol | |
ID | 5408091 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 715520 |
End bp | 717202 |
Gene Length | 1683 bp |
Protein Length | 560 aa |
Translation table | 11 |
GC content | 28% |
IMG OID | 640870470 |
Product | putative membrane-associated, metal-dependent hydrolase |
Protein accession | YP_001406348 |
Protein GI | 154148837 |
COG category | [R] General function prediction only |
COG ID | [COG2194] Predicted membrane-associated, metal-dependent hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.000171309 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAATAAAT TCGTAATTTT TATATTTTTT GTGCTGATAT TTTTTATTTT ATCTCCAAAA ATAAGCATGG AATATCTTAT TCACAGTTTA AAATATTGCG CGTTTTCAGC TTTAATTTTA CTTTTTGCAA GCAAGCTTTT TAAGAATAAA ATTAGCTATT TTATAGCAGT TCTATCACTT TTTATATTAC TTTTCATTCC GTATTTTTTT ACATTTTTTG ATGCTGTTTT TAAGACAAAA CAGTTTTATA ATACGCAATT TTCAGTTCTT TGTGTGGCTC TTGTTTTGAC ATTAGCAGGC TCAAAATCTA AAATTTCAGC TGTTTTTATT GTTATTTTAA GTGCGGTTTT GCCCTTAATT TATCTCGGGT ATTTTTCTTT TGCTTTAAAA CCTTTCAATC AGCCGGCTTT GTTTGCGATG CTTGAAACAA ATAAAAATGA AGCATTCGAG TATTTTATGG ATAATAAAAA TATTTGGACG TATGTATCTG TTGTTTTTGT TTTAATGGTT TCATTTTTAT TTGTAAAATT TTGCAAAAAA GCGGAATTTT CATTTAAAAA CGGAAAAATT CTTACTGTTT TTATTTTAAT AATTGCTGTT TTTAATAGTT ATAAAGAGTG TTGGTTGCTT AAAGAGCCTT TTTTTATCGA TGAGATAAAA GCACAAATTC GTATGCAGGA AAATTATGCA AAAAACGCAC AAAAAAGAAT GGACTTGTTA AAAGACTCTG TATCATCAAA CGATGATGGA GTTTTTGTGC TTGTTATTGG AGAGAGCGAA AATAAAAATT TTATGAGTGT ATATGGGTAT CAAAAGCCGA CTACTCCTTA TTTAAATAGG TTAAAAAATA GTAAAAACGC TATATTTTTT AGTGAGGCTC ACTCAAATTA TACTCATACT GTCCCTGTTT TAATTTATGC ATTGAGCGCT AAAAATCAAT ATGAAAATAT GGATGAAGAT CTGGCGCCTA CTTTAATTGA AACAGCTAAA GCTGCCGGAT TTAGCGTATA TTGGCTTTCA AATCAGGTAA AATTCGGCGC TTTCGGTGAA AATGTATCAA AAATTTCAAT TCCTGCAGAT GAAAAAATTT TTACCAGCGA CTTTGACGAT AAAGAAAAAT TTGATGAATC CTTATTAGAA CCGTTAAAAT CGTTAAATTT AGCTAAAAAA TCTTTAATAA TCGTACATTT GCTCGGTTCA CACAGTACTT ATAAAAGACG TTATCCTAAA AATTATGAAA AATTCGGCAC AAGTCGTCTT GAAGCATATG AAAACTCAAT TTTTTATAAT GATGAAATTT TAAGACGTAT AATAGAAATT TCTAAAAATT TTAAAAACTT CAAAGCGCTT GTTTATATGA GCGATCACGG CGAAAATCCT GTAAAAGCTT CGCACGATGC TGTAAATTTT GTTTATGGAA TGTGTCAAAT TCCGTTTTTT ATATATTTTA ATGACAGCTT GCAAAATAGT GATATTTACG CACGTTTAAA TAAAAACAAA GATGAATTTT TTACAAACGA TCTGCTTTAC AATGTAATGT TGTCTTTGAT GAGTATAAAA ACTCATATAA ACACTAAGAC AAACGATATT TCAAGTGAGT TTTACGATAA TAACAAAAGT AGATTTTTAA CGCTTCATGG TAAAATTAAA ATTTTGGATG CTAAAAAAAT GGATAAAAAA TAA
|
Protein sequence | MNKFVIFIFF VLIFFILSPK ISMEYLIHSL KYCAFSALIL LFASKLFKNK ISYFIAVLSL FILLFIPYFF TFFDAVFKTK QFYNTQFSVL CVALVLTLAG SKSKISAVFI VILSAVLPLI YLGYFSFALK PFNQPALFAM LETNKNEAFE YFMDNKNIWT YVSVVFVLMV SFLFVKFCKK AEFSFKNGKI LTVFILIIAV FNSYKECWLL KEPFFIDEIK AQIRMQENYA KNAQKRMDLL KDSVSSNDDG VFVLVIGESE NKNFMSVYGY QKPTTPYLNR LKNSKNAIFF SEAHSNYTHT VPVLIYALSA KNQYENMDED LAPTLIETAK AAGFSVYWLS NQVKFGAFGE NVSKISIPAD EKIFTSDFDD KEKFDESLLE PLKSLNLAKK SLIIVHLLGS HSTYKRRYPK NYEKFGTSRL EAYENSIFYN DEILRRIIEI SKNFKNFKAL VYMSDHGENP VKASHDAVNF VYGMCQIPFF IYFNDSLQNS DIYARLNKNK DEFFTNDLLY NVMLSLMSIK THINTKTNDI SSEFYDNNKS RFLTLHGKIK ILDAKKMDKK
|
| |