Gene CHAB381_0766 details

Gene Information

• Locus tag: CHAB381_0766
• Symbol: selB
• ID: 5408688
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Campylobacter hominis ATCC BAA-381
• Kingdom: Bacteria
• Replicon accession: NC_009714
• Strand: +
• Start bp: 706599
• End bp: 708416
• Gene Length: 1818 bp
• Protein Length: 605 aa
• Translation table: 11
• GC content: 32%
• IMG OID: 640870462
• Product: selenocysteine-specific translation elongation factor
• Protein accession: YP_001406340
• Protein GI: 154148887
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG3276] Selenocysteine-specific translation elongation factor
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00475] selenocysteine-specific elongation factor SelB; [TIGR00485] translation elongation factor TU

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAATAGTC TGATAATCGG TACAGCAGGT CATATTGATC ATGGAAAAAC AGCTTTAATA 
AAAGCTTTAA ACGGTTTTGA AGGCGATCAA AATCCAAATG AAAAAGTTCG CAAAATTACT 
ATAGATCTTA GTTTTTCGCA TTTACAAAAT AAAAATAAAA ATATCGCTTT TATAGATGTT 
CCAGGACACG AAAATTTGGT CAAAACAATG ATTTCGGGGG CCTATGCGTT TGATGCGACG 
CTTTTAGTCG TAGCAAGCGA TGACGGAATT ATGCCTCAAA CAAAAGAACA TTTGCAAATT 
TTATCAATTC TTGGGGTTTC AAGAATTGTG CTATGTATTA CAAAATGCGA TTTAACGGAT 
ACAGTGCGTC AAAAATACGT CGAAAATGAA GTTAGAAATT TTGTTAAAAA TTTTAAAAAT 
CTTACGATTT TAAAAAGTTT TTTTATAAGT ATTAAAGATT TGTCCGGCGT TTCCGGTTTG 
CGCGAATTTT TATTTACCAT TGAACCTATA AAACGCGTCG ATAGCGAAAT TTTGCATTAT 
TATATAGATA GAGTTTTTTC TTTAAAAGGT TTCGGAACAA TTGTTACCGG AAGCCTTATA 
AGCGGAATTT TGCGAAAAAA TGAGAAAATA TACAACTGCG ATTTGGATAA AAGTTTTATT 
GTAAAAAATC TTCAAATTCA TGATGAAAAT GTCGAAATTG CAAGCTCACC AAACCGTGTA 
GCAATAAATT TGGATGCCAA AACCTCGGAG CTTGAAAAAG GACAGATTTT TAGTAAAAAA 
GGTTTTTTTC GCGGATTTAA TGAGTGTGAT TGCGTTTTTT ACGGTGAAAT TTCTCATAAA 
CAAAATGTCA TTTTTTGTGT CGGTTCGCGT CAAATAGCTG CAACAGCACT TATTTTAAGC 
GAAAATGGAA ATGAAAAATT TATAACTTTT AAGTTTGAAA AAGAAATTTT TGTAAAATTT 
AACGAACATT TCGTAGTTTT AGCGTCTTCT CGCGTAATAG GTGGAGGAGA TATTCTAAAT 
CCTGTTACCG AGCCGCTTAA AAAATCGCAA AAAATTGCTC TTTTATGTGA GCTGAAAGAT 
AAAAATTTCA TTAAGGTTTT TGAAATTTTA TCATCTTCTC ACAAACATGG ATTTGGTCTT 
ATTTCGTCAT TTCAGCGCTT TGATATGACG CATGAAAATG CTTTGAAAAT CGCACGAAAT 
TTAAAAAACG CCATAACGGA TGAAAGCTCG CTTTGTATTT ATGATAAAAG CGCCGCTGTA 
GGCGATTTAA AGGATTTTAT AAATTTTATC GTTTCAAAGA ATGATAGGGC GGTTATTTCG 
GCACAAAGTT TAGCTTTAAA AATTTCATGG GCAAGTCCGT TTTTGTGTGA TTTAACTTTA 
AACGAACTTA TAAAAGATAA AATTTTACAA AAAAACGGAA ATCTTTTTAT AAAATTCGGA 
GCCGATTTTG ATGAAATTAC GCAAAGTCTG GAAAATAAAA TTTTTGAAAT TTTAAGTTGC 
GGCGGTATCG CGCCGATTGC ACCTTACAAT ATTTACGACG AGCTTGAAAT AGATAGAACC 
TGTGGCGACA ATGCGATGAA GAAACTTACA AAAGCCGGTA AAATCGTGCG AATTACGCAC 
AATGTATTTT TAACCGATCA AAATTTGCAG AAACTAATCA AAAAAATGCG CTCAATTATT 
GCTTCACGTG GCTTTGTAAA TGTCAGCGTA CTGAAAGATG AACTTGGTAT CAGTCGTAAA 
TTTCTGATTG CATATTTGGA ATATCTGGAT CTTTTTGATG ATATAAAAAA AGACGGTAAT 
AATCGCATTT TTAAGTGA 

 

Protein sequence

MNSLIIGTAG HIDHGKTALI KALNGFEGDQ NPNEKVRKIT IDLSFSHLQN KNKNIAFIDV 
PGHENLVKTM ISGAYAFDAT LLVVASDDGI MPQTKEHLQI LSILGVSRIV LCITKCDLTD 
TVRQKYVENE VRNFVKNFKN LTILKSFFIS IKDLSGVSGL REFLFTIEPI KRVDSEILHY 
YIDRVFSLKG FGTIVTGSLI SGILRKNEKI YNCDLDKSFI VKNLQIHDEN VEIASSPNRV 
AINLDAKTSE LEKGQIFSKK GFFRGFNECD CVFYGEISHK QNVIFCVGSR QIAATALILS 
ENGNEKFITF KFEKEIFVKF NEHFVVLASS RVIGGGDILN PVTEPLKKSQ KIALLCELKD 
KNFIKVFEIL SSSHKHGFGL ISSFQRFDMT HENALKIARN LKNAITDESS LCIYDKSAAV 
GDLKDFINFI VSKNDRAVIS AQSLALKISW ASPFLCDLTL NELIKDKILQ KNGNLFIKFG 
ADFDEITQSL ENKIFEILSC GGIAPIAPYN IYDELEIDRT CGDNAMKKLT KAGKIVRITH 
NVFLTDQNLQ KLIKKMRSII ASRGFVNVSV LKDELGISRK FLIAYLEYLD LFDDIKKDGN 
NRIFK