Gene CHAB381_0736 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0736 
Symbol 
ID5409463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand+ 
Start bp674580 
End bp675263 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content31% 
IMG OID640870435 
Productbeta-lactamase HcpA 
Protein accessionYP_001406315 
Protein GI154148372 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.519148 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAA TTTTTATAAT TTTAGCAATA TGCGTGCTGA AATTATGTGC TTTTACAGAT 
AATACTTCTA AAAATTTTAC AGATTTTCTT ACACAAAAAG ATTCTTATGT ACATAGCGAC 
GAAAAAAAGT ATAATGACGG TTTTGTTAAA TATAGCGAAA AAAAATATGA TGAAGCTGTT 
AAAATTTGGG GCGATCTTTG CGATGATAAA GATATGAGAA GTTGTGTAAA TATAGGTTTT 
TTATATGATA ATGGACTTGG TGTCAAAGCC GATAAAAACA AAGCAAAAAA ATTCTATGAA 
AAGGCTTGTT TCGGTGAAGA TTGGCTAGGT TGTAAAAATT TAGCCATCAC TTATTTTAAA 
AATCAAAATT TTAGTAAAGC AGCTGAAATT TTTGCTAAAG GTTGCGAGCT GAAAGACGGT 
TTTTCGTGTG CAAATCTTGG GTATCAATAT GAAAACGGCG ATGGAGTCGC CAAAGATGAA 
TTAAAAGCGA TTGAATTTTA TAAAAAAGGC TGTATTTATG AAGATGGTTT CGCGTGTCTG 
AATTTTGGTG TCAGTGAGGC GAATAGAAAT AATTTCAATG AAGCGCAAAA ACTTTTTAAA 
AAAGCTTGCG AGCTTGGTAA TAAAAATGCT TGCGATTACT ATAAACAAAT AACAGACGAT 
GAATTTAAGA AAGCGCATAA ATAG
 
Protein sequence
MKKIFIILAI CVLKLCAFTD NTSKNFTDFL TQKDSYVHSD EKKYNDGFVK YSEKKYDEAV 
KIWGDLCDDK DMRSCVNIGF LYDNGLGVKA DKNKAKKFYE KACFGEDWLG CKNLAITYFK 
NQNFSKAAEI FAKGCELKDG FSCANLGYQY ENGDGVAKDE LKAIEFYKKG CIYEDGFACL 
NFGVSEANRN NFNEAQKLFK KACELGNKNA CDYYKQITDD EFKKAHK