| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0666 |
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| Symbol | |
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| ID | 5409578 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | + |
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| Start bp | 611803 |
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| End bp | 613074 |
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| Gene Length | 1272 bp |
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| Protein Length | 423 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640870366 |
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| Product | VI polysaccharide biosynthesis protein VipA/tviB |
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| Protein accession | YP_001406247 |
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| Protein GI | 154148654 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0677] UDP-N-acetyl-D-mannosaminuronate dehydrogenase |
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| TIGRFAM ID | [TIGR03026] nucleotide sugar dehydrogenase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.306604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAAATT TAAAAGATAA AATCATAGCT GTTGTTGGGC TTGGATATGT TGGAATGCCT
TTGCTTAACG CATTTTCCAA AAAATACAAA ACAATCGGAT ATGACATAAA TCAAAAAAGA
GTTGAAGAGC TTAAAAGTGG CGTAGATAGG ACGCTTGAAT TAAATAACAG TCAGTTAAAA
GAAATGGATA CTTTTTATAC TACTGATATA AATGATCTAA AATGTGCAAA TATATTTATC
GTGACGGTTC CTACGCCGAT TGATTCTAAA AATAAGCCGG ATCTTACACC ACTTATAAAA
TCAAGTGAAA GCATAGGAAA AGCGTTAAAT AAAGGTGATA TAGTAATATA TGAAAGTACA
GTTTATCCTG GTGTTACTGA AGAAATTTGC GTACCTTGCT TGGAAAAAAC ATCAGGACTT
AAATTTAATA TTGACTTTTT TTGCGGATAT TCGCCCGAAA GAATAAATCC TGGTGATAAA
GAACACACTG TATCTAAAAT TTTAAAAGTT ACAAGCGGCA GCACGCCTGA AATTGCCGAT
GTTGTAGATG CGCTTTATAA AAGTATAATA ACTGCAGGAA CTTTAAAAGC AAGCAGCATA
AAAGTAGCAG AAGCGAGTAA AGTCATAGAA AATACTCAAA GAGACGTAAA TATTGCGCTT
ATAAACGAGC TTGCTCTTAT TTTTGATGCG ATGAATATTG ATACGAATGA AGTTATTGAA
GCGGCTTCAA CTAAGTGGAA TTTTATCAAG TTAAAACCAG GGCTTGTCGG AGGTCACTGC
ATAGGTGTAG ATCCGTATTA TCTCACATAT AAAGCCGAAG AGCTTGGATA TAAACCGAAT
TTAATTTTAA ACGCAAGACA CATAAATAAT TCAATGGCAG GTTTTATAGC AAACAAAACT
ATAAAAACAA TGATAGATAA CGATATTAAA ATTAAAGGCT CAAACGTTCT TGTTTTGGGT
GTTACATTTA AAGAAAATTG CCCTGATTTA AGAAATACAA AGGTTTTAAA TATAGTGGAA
AATTTGGAAG AATATGGCAT AAATGTAGAT ATTTATGATC CTTGGGTAGA TACAAATGAA
TCAAATATCA CTTTCAATCA CGAAATTATC GCAAATCCTT TCAAGAATAG CAAAAAATAC
GACGCTATAA TTGTAGCTGT AGCTCATAAT GAGTTTAAAA ATTTAAAAGA TAGCGATTAT
GATAAAATTT TAAATCAACA TATCATAATT GATATAAAAG GTATTGTAAA TAAGCCGACT
TGGAGATTAT AA
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| Protein sequence | MLNLKDKIIA VVGLGYVGMP LLNAFSKKYK TIGYDINQKR VEELKSGVDR TLELNNSQLK
EMDTFYTTDI NDLKCANIFI VTVPTPIDSK NKPDLTPLIK SSESIGKALN KGDIVIYEST
VYPGVTEEIC VPCLEKTSGL KFNIDFFCGY SPERINPGDK EHTVSKILKV TSGSTPEIAD
VVDALYKSII TAGTLKASSI KVAEASKVIE NTQRDVNIAL INELALIFDA MNIDTNEVIE
AASTKWNFIK LKPGLVGGHC IGVDPYYLTY KAEELGYKPN LILNARHINN SMAGFIANKT
IKTMIDNDIK IKGSNVLVLG VTFKENCPDL RNTKVLNIVE NLEEYGINVD IYDPWVDTNE
SNITFNHEII ANPFKNSKKY DAIIVAVAHN EFKNLKDSDY DKILNQHIII DIKGIVNKPT
WRL
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