| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0662 |
|---|
| Symbol | |
|---|
| ID | 5408064 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 607798 |
|---|
| End bp | 608793 |
|---|
| Gene Length | 996 bp |
|---|
| Protein Length | 331 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 25% |
|---|
| IMG OID | 640870362 |
|---|
| Product | putative lipopolysaccharide biosynthesis protein |
|---|
| Protein accession | YP_001406243 |
|---|
| Protein GI | 154148759 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0132894 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGAAAATTT TACAAACACT TCAATGGATT CAATTTGCCG GAACTGAAAA AGTTTGTGTT
GATCTATGTA ATGAGATGAG TAAAAATCAT GAAGTAATTT TACTTTCAAA TAAAGATATA
ACACAAAAAT TAAATAAAAA TGTGAAATTT ATAGAGTTTA ATTTTGATAA AAGTCGTTTT
AATCCATTTT TTTTATATAA AACTGCTAAA TTTATAGAAG AAATAAATCC TGATATAATT
CAATGCCATA ATGCAAAAGA ACTTGAAATT ATGAAATATA TGCAATTTTT TTTAAAGAAG
AAAATTCCAA TCGTTGCCAC AAGACATAAT GCGGAATTAA AGAAGAAATA TGCTTTTGCT
AATCTTGGGA TAGCTGTTTC TGATGAAACT ATGAACTATA TGAATGCTAA AAAAAATATT
CTTATAACAA ATGGCGTGAG TAAAGTAAAA CCTAATTTGA TAAAAAATGA TAAATTTACA
ATTTTAGGTG TTGGTAGGCT CGCACCTGTT AAAGGATGGG ATCTTTTAAT AAATGCTGCC
TCAAAGCTTA ATTTTGATTT TAAATTACAA ATTTTAGGTG AAGGTGATGA AAAAAGACAT
TTGCAAGATT TAGCCTCAAG ACTTGGCATA AAAGATAAGG TTGAATTTCT AGGTTTTAAA
AATAATGTGG CTGATTATGT AGCAAGTTCT GATTTACAAG TTATAGCATC TGTTACAGAG
GGGCTTTCTA TATCGCTGAT AGAAGCCATT TTTTATGCAA AAATTTTAAT AGCCTCAAAT
GTTTCAAATC ATGAAAATCT TATTGGTAAA AAATTAGTTT ATAATAGAGA TGCAAAAATT
TTAGCTGATA ATATAAATGA TATTTATAAA AACTATAAAG AATATCAAGA TGAATTTGCA
AAGGTAAAAT TAAAAAAAGA TAACTTTAGT ATAGAAAAAA TGACACAAAA ATATATAAAG
GCATATGAAA ATTTGATAGA GGATTTTAAA AAATGA
|
|---|
| Protein sequence | MKILQTLQWI QFAGTEKVCV DLCNEMSKNH EVILLSNKDI TQKLNKNVKF IEFNFDKSRF
NPFFLYKTAK FIEEINPDII QCHNAKELEI MKYMQFFLKK KIPIVATRHN AELKKKYAFA
NLGIAVSDET MNYMNAKKNI LITNGVSKVK PNLIKNDKFT ILGVGRLAPV KGWDLLINAA
SKLNFDFKLQ ILGEGDEKRH LQDLASRLGI KDKVEFLGFK NNVADYVASS DLQVIASVTE
GLSISLIEAI FYAKILIASN VSNHENLIGK KLVYNRDAKI LADNINDIYK NYKEYQDEFA
KVKLKKDNFS IEKMTQKYIK AYENLIEDFK K
|
|---|
| |