Gene CHAB381_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0658 
Symbol 
ID5409231 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp603774 
End bp604970 
Gene Length1197 bp 
Protein Length398 aa 
Translation table11 
GC content27% 
IMG OID640870359 
ProductO-antigen polymerase family protein 
Protein accessionYP_001406240 
Protein GI154148169 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3307] Lipid A core - O-antigen ligase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.238334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCATGAGT ATTTAATTGG CTTAAAAGAA GACAAATATA AACTTGCTTT TAATATTATA 
CTTTTTATTT GGCTTTGTAG TATTCCTTTT AAGAATGCCA TTTATCAAAT TTCAACTGTT
TTGGTTTTGC TATTTTTTGT AGTGCATTTG ATTATAAATA AAAACTACTC TGTTTTAATT
GAAAATTTTA AAAAAACTAA AGTTTTAGCT GTTTTTGTTG CTTTGATTTT GCTTAGTATG
TGTTTAGCAA ACATCTTAAA TCCTGAACTT TTAGCCAAAA AATCTTGGCA TCATATAATT
TCATTTTTTT ATAGATATGT TTTGGTTTTT ATAGCTTTAG CGTATTTTTA CAGGCTTAAG
TATTTTGATA AAAAAGTATT AGTTGATGTC TTTTTATTCG GACTTTTGTT TGTAGCAGCC
ATCGCAATTT TTATGCTAAT TTTAAATCCA GATATTGTTT TAAATTCAAA CGCAGCCTAC
AATGGCGATT ATGGTCTTAA AGGAACTTTT GATAACAGAA ATGCCATGGG ACTTGCTATG
AGCTTAGGTG TTGTCTTTAC TCTTTTTATT TTAAAAGACA ATATAAAAAT AGGATTAGTC
TTACTTGCAA TTTTTGGTTT TTGTATGCTA TTTTCTTTTT CACGTTCAGG TTGGGTTGCC
GGTTTTTTTG CATATATCGT TTTTATCGCG TTTTATTTTA AACAGCTTAA TAAAAAATTT
TTTATAGCTG TTGGAATTTG TATTTTAGTG CTTATATGTT TGTATTTTGG TGTAGATAGT
TTGCAAGATA GGGTAAATTT GCTTCTTCAA GGAAATTCCA GCCATAGAAC TGATATTTGG
AAATTTGGAC TTACTCAAAT ACCAAATAAT TTATTTTTTG GCCACGGTGT TAGTTGTTGG
AGAAATTTAA ATTTACCGGC TTATATAGCA GTACATACAG GACTTCATAA TTCCACTTTA
GAAATATTAC TTTTTACTGG AATATTTGGT TTGGTGGCAT GGATTAGTGC TGTTTTAACC
GTATTTTATC AAATTTTAAA AGATAAAAAT TATATATATT TGTCTTTACT TGTATATTTT
GTAGTTATTA CACAGTTTGA TTTTAGTGTT TTTGACTCAA AAGAACTTTT TAGCGCTGTA
ACTATTTTTA TGTTTTTAGT GTATTCGGAT AAATTTAAGG CTAAACTTTG CAAATAG
 
Protein sequence
MHEYLIGLKE DKYKLAFNII LFIWLCSIPF KNAIYQISTV LVLLFFVVHL IINKNYSVLI 
ENFKKTKVLA VFVALILLSM CLANILNPEL LAKKSWHHII SFFYRYVLVF IALAYFYRLK
YFDKKVLVDV FLFGLLFVAA IAIFMLILNP DIVLNSNAAY NGDYGLKGTF DNRNAMGLAM
SLGVVFTLFI LKDNIKIGLV LLAIFGFCML FSFSRSGWVA GFFAYIVFIA FYFKQLNKKF
FIAVGICILV LICLYFGVDS LQDRVNLLLQ GNSSHRTDIW KFGLTQIPNN LFFGHGVSCW
RNLNLPAYIA VHTGLHNSTL EILLFTGIFG LVAWISAVLT VFYQILKDKN YIYLSLLVYF
VVITQFDFSV FDSKELFSAV TIFMFLVYSD KFKAKLCK