Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0648 |
Symbol | |
ID | 5408418 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | - |
Start bp | 594927 |
End bp | 596249 |
Gene Length | 1323 bp |
Protein Length | 440 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640870349 |
Product | mate efflux family protein |
Protein accession | YP_001406230 |
Protein GI | 154149433 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.849411 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGAGC TTTCGTTATT CAAACTCTCA ATAGCAATGT ATATCGAGAT GTCACTCAGA CTTTTGACAG TTGTTATAAA TACATATATG ATTTCACGCG TAAATGTTCA TTTAATAGGC GCTCTCGGCG CGGGAAATCA AATTTTTATG CTTTTTATTA CAATTTTCAG TTTTTTAGGT GTCGGCTGTT CCGTTCTCGT TTCGCAAGCT ATTGGCGCAA AAAACAAATC CCTAGCTTTA AAAGCAATTC ATATGAGCAT TGCATTCAAT GCGGTTCTAG GCTTTTTTTG CGGAATTTTT GTGTTTATTT TTTCCGATTT GTTACTTAAA ATTTTGCAAG TTCCAAATGA ACTTTTACAT GAAAGTAGCG TATATCTGCG CGTTTTAAGT GTAGTTTTTA CAATTGATGC GATAGCTATT GTAATTTCTG CGATAATTCG CGTATACGGA TATGCAAATC ACATTATGTT TGTAGCGATA TTTATGAATA TCATCACAAT AATAGGAAAT TATGTAGCAC TTTTTGAACC GTTTGGAATG CCGTATCTAG GACTTTTTGG TATAGGGCTT TCTACTATTT TCGGTAGAAT TTGCGGCATT ATTTTATTTT TTATAATTGC CGTAAAAATA GTGCGCGTTC GCTTTTACTT AGTTCTTTTT TTAAATTTCA ACAAAAACAT TTTACGTAAA ATTTTATCAG TAGGATTACC GAGCGCCGGA GAAAATTTGC TTTGGACAGT TCAATATATG ATCGCTTTCG GCTTTGTAGC AAGTATGGGA AAATCAAGTT TAACGGCTCA AACCATTTAT TTTCAAATTT CAGCTTTTAT ATTTTTTGCA GCAAGCGCGA TAAGCATGGC AAACGAAGTC ATCGTAGGAC GTTTAGTAGG AGCCGGCGAA AGTGAAAAAG CATATAATCA AACATTCAAA ACTTTAAAAA TTGCACTTGC AATTACCGCA CTTTTCATAT TTTTAGTATT TATTTCAAAA GAAAAAATAA TGCAAATTTT AAATTTCACG CCTGAGCTTT CAAATACGAT GAGGCCGCTA TTTTATCTAA CAATAGTGCT TGAAATCGGA CGAAGCTTTA ATATCATTTT CGTAAATGCG CTTAGAGCAA GCGGGGATGC CAGATTTCCA TTTTATATGG GATTGATTTT TATGATTGGA GTTTCCATTC CTTTGGGATA TTTTTTAGGA ATTCATTTAG GGATTGGAAT TTTGGGCGTT TGGATAGGAT TTTGCGCCGA TGAATGGTTA AGAGGAATCG CTCACACTTG GCGCTGGAAA AGCAAAAGAT GGATAAGCAA AAAATTAGTT TGA
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Protein sequence | MKELSLFKLS IAMYIEMSLR LLTVVINTYM ISRVNVHLIG ALGAGNQIFM LFITIFSFLG VGCSVLVSQA IGAKNKSLAL KAIHMSIAFN AVLGFFCGIF VFIFSDLLLK ILQVPNELLH ESSVYLRVLS VVFTIDAIAI VISAIIRVYG YANHIMFVAI FMNIITIIGN YVALFEPFGM PYLGLFGIGL STIFGRICGI ILFFIIAVKI VRVRFYLVLF LNFNKNILRK ILSVGLPSAG ENLLWTVQYM IAFGFVASMG KSSLTAQTIY FQISAFIFFA ASAISMANEV IVGRLVGAGE SEKAYNQTFK TLKIALAITA LFIFLVFISK EKIMQILNFT PELSNTMRPL FYLTIVLEIG RSFNIIFVNA LRASGDARFP FYMGLIFMIG VSIPLGYFLG IHLGIGILGV WIGFCADEWL RGIAHTWRWK SKRWISKKLV
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