| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0642 |
|---|
| Symbol | |
|---|
| ID | 5409204 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | + |
|---|
| Start bp | 586773 |
|---|
| End bp | 590930 |
|---|
| Gene Length | 4158 bp |
|---|
| Protein Length | 1385 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 31% |
|---|
| IMG OID | 640870343 |
|---|
| Product | sensor histidine kinase/response regulator |
|---|
| Protein accession | YP_001406226 |
|---|
| Protein GI | 154147903 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase
[COG0784] FOG: CheY-like receiver |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAATTAA GCACAAATAG TTCGCTCTTT ATAATAAGTG CGGTTCCGCT TATGTTGATT
TTCGTGTTTG CGTCATATTT CTTTTATAAA TCTTTCGCAG ATTATTCGAA AATTCAAAGT
CTTACAACTC AGTTTGATAA TTCTAGAGAA TTAAATAAAG TTCTTGAGGA ATTAGGTCGT
GAACGTGGTT TGACAGCTGC ATTTTTGGGT AGCGGCGGCG CCATAGGAAG CGGTGAAGTT
CTAAAAAAAC AAAGAGTTAC TACAGATACC GCTATTTCGA CGTTTAAGCG TAAAGCAAGT
GAATTTGAAG AACGTGGAAA TTTTTTGAGC CAATTGCTTG GTTATAAAAA CGAAGAATTG
AAAAATAATA ATGCAAAAAT TTTATCACTT CTTGGAAAAT TACCTGAAAT AAGAACGGTT
ATAGATCAAA AAAAACCAAG TTTCGTAAAT TTGTATGACG AATATTATAG AAATATTGAC
ATTCAATACG CTGTTTCGCA ACAAGCTATT TCTAAATTTT TTACTCAACC TGATATTTCT
ACGTGGGCCA CAACACTTGC TAATACTTAT TCAAGTCTTA TGAATACAAT TTCAGAAAGA
GACTATGTAA TAGAAAATAT CGTTGCAAGC AGATCTATGA ATACAAAAAC AATTCAACGC
TGGAAAGATT TCAGTAATGC AAGCAGATTG CCTGTATATA CATATTTACC TGCATCTAAC
GCAAAAAATG AAATTCAAAA AATTCTTGAC AATGTAGAAA CTAAAAATAT TTTAAACGAT
ACTGATAGAC TTGATTTGCT TTTGCAACAA GATGCGCTTA GCGGTCAATA CCGAATGTCA
TTTATTGAGT GGTTTACTAT TATGACACAA AAATATAATA TTACAAAAGA AATTATTGTA
AAAATTGATT CCGAGCTTAA TAAAGTTGCT ATTGCAAATG TGGCGGCAGG AAAACAAATA
CTATATATTT CTGCTGTTAT TTGGGCTTTT ACATTAGTTC TTATATTTTT CTCAGCCAGT
GTGTCAAGAA AATTTTCTAA AAACGTTAAA GAACTCGGTA AAGTTATCGG TCGTATCGGT
GAGCTTTCAA ATCAAGAGCA AAATATTGAT ATTCAATCAA GCGAAGGAAT TACAAAGGCT
TACGGCCTTA TACAAGATGC TTTGGACTTG GTTACTTATC AAAAAGAAGC AGCCGAAGAT
GCAAACAAAG CAAAATCTAT TTTCCTTGCC AATATGTCGC ACGAAATCAG AACTCCGCTT
AACGGTGTTA TCGGTTTTAC AGAGCTTTTA AGAAATACAG AGCTTGATGA AGAGCAACAA
GATTATGTGG ATACTATCGA ACAATCATCT GAAAACCTAC TTACAATTAT AAATAATATT
TTGGATGTTT CTAAAATCGA AAGTAACAAA GTTGAGCTTG AAGATATCTT ATTTAATCCT
ATTCAAGATT TTGAAAGTGC GGTTGAAATT TATGTTGCAA AAGCAACTGA GAAAAATATA
GATATTTTAT TATACATTGA TCCTACTTTG ATTCATCACC TATACGGCGA TATCACAAAG
ATTAAAGAAG TTTTAATCAA TTTGATGTCA AATGCCGTAA AATTTACACC TGAGGGTGGT
ATGATTGCAG TAGAAATTGT CAGAGTAAAA AGTGATAATC CAAATGAGGC AACTGTAAAT
TTTAGTGTTG AAGATACTGG AGTTGGAATT GCGGAAGATA AATTGGTTAA TGTATTTAAT
GCTTTTTCAC AAGCCGATTC TACAATTACA AGAAAATATG GCGGAACAGG ACTTGGATTA
ACAATTTCAT CTAAATATGT TGCTATGATG GGTGGAAAGC TAGAAGTTAA ATCGACTTTA
GGAAAAGGAA CAAGATTTTA CTTTACACTT ACATTTAAAG AAACACAAAA GACAAATGCT
GAAAATATGT TTGATGGTAT TAAACAACTT AGTTGTGCTA TGTTTGCTGA GCAAAGCGAT
GTAATGTTTA ATAATATTTT CAAAAATTAT ATTGAACACT TCGGTGCTAA AATTTCAATT
TTCTATGATA AAAATGAATT TTTAAATAGT GCCGATAGTG GAAAGTTCAA TGTTCTTGCA
ACTAGATTTA AAAATTTTGA TAGTATTAAA GATAGCGTAA AATTGCCATT ATTATTATCT
TTAAAACCGA AAGAACTTCA AAGTATAACT ATAACAAATC CGAATGTATT TACAATTTCA
GAGCCTGTAA ATGTATCTAA ACTTGTAAAA GTCGTAGGTA GAATTTCAAA AGCAGGCGCA
GTCCCAGGTT TAAGAGGTGA TAGTGGATTT GAAAGCAGTA ATTTAAAAGA TATCATTCAA
AATAGTCTTA AAAAACAAGG TGAACCTGAA ATAAAAATTA GTGAACCGGT TGCAGAACAA
GTTATTGAAG AGGTGTCTGA GCCTGAAATT TCTGTTGTAC AAGAAGAAAT TAAGCCTCTT
GATATATCTT TAGATGATAA TTTATTTTCA CAAAAAGCAG TTGAAACTGA GCCTGAGACT
TTATCGGCTG AAAGTGAACC GAAAATTGAA ATTCCAGTTG AACCTGTTGT TACGGAACCT
GTAGTACATG AACCTGAAAT TAAAGTAGTA AATGAAGTAC AAAGTGACGA AGAAGAAGCA
GCTAAATTTG ATGAGCCTAT TAGTTTGGTT ATTCCGGATG AAACTTCTAA AGTAAAAATT
GAACCTGTTG TTGAATCTGT TAAATCACAA GAACCTGAAG TTGTTACTGA AGAAGCTGTT
AAACCTGTTG ATTTTGAAAT ACCTGTTGAA AAAGTTGCAG CTGAATCTGA AATAGTCGAG
GAAAAAATTC CGGAACCTGA AATAATTAAG TCTGAACCTG CAATAAAAGA AACGATAAAA
CCTAAAACTA AAGTAGTTAC AGAATATGTG GATAAAACTG AAATAGTTGA AGAAACTATA
ATGGTAGATG AAGAATTTGA AGAGCCTGTT ACTACTTATG AAATCGTTGA AAAACCTGAA
ACTGTGATGG TAGAAGTGGA AGAGGAAGTA ATAGAAGAAA TAGACGATCC AAATGCGGCA
TCTTCAGGAG TAGCAGGTGG AGGAGATGAT GTACCGCTTC TAAAACGTAC ATACAATGCA
AATATTTTAA TTGCAGAAGA TAATGAAATA AATCAAAAAC TTATGAAACA CACATTGAGC
AGTTTTAAAG CAAATCTTAC AATAGTTGAA AATGGTCTTT TAGCTTTAGA GGCTCGTAAA
AGCGGCGATT TTGATTTGGT ATTTATGGAT ATTTCAATGC CTGTTATGGA TGGAATTGAA
GCTACAAAAC AAATCAAACA ATACGAACAG GAAAATAATT TAAAACACAT TCCAATTGTT
GCTGTTACTG CAAATGCATT AAAAGGCGAC AGAGAAAGAT TTATGTCACA AGGGTTGGAT
GAATATTGTA CTAAACCGAT TAAAAAGGAT ATTTTAGCTT CTATGCTTGA TATGTTTATT
AAAAATAAAC GTTCTGATGG TGCAGGTGCG GCTGCTGCTA CAAATGAACC ACCAAAGAAA
ATAAAAGTAA AACGCAAAAT TAAAAAACAA GTGCCAAAAA CAGTTATTAA AAAAGTTAAA
GTTCCAAAAA CAGTTATTAA AAAAGTTGTA AAAAAAGTTC CTAAAGTTGT AAAAAAAGAG
ATAACTAAAA AAGTTCCTGT TCAAAAAGTA GTAGAAATTC CGGTAGAGCA AGTATCTACA
ATAGACACTT TTAGCGAAAA TTTAAATAAA ACTTTAAATA TTAAATCGGA TATTGAGCAA
AAAGTTGAAA GCAAACCTAT AAATGCTGAA ATTTTTAAGG ACGTGCTACT TTATAAAAAT
AATCCGATTG AAAATCGTAT TTTTGCTAGT ATATTAAATC ATATGGAACT TAGCGTAGAT
ATGGTTGAGA GTTTTGATGA ATTTGTTAAA AAAGTCAAAG AGAGTGGTTA CAAGTTATCA
CTAATTGACG ATAAGGTGCC AAATTTTGAT GCTTCATTAC TACAAAATTC TATTGATTTA
AGTCCAAGTG ACATTAAGTC TGTTGTATTT ACCGATAATG TAAGTAAAAA TACACTTAAA
GGTAAGTTTA ATGATGTTAT TAAATATGGC ATTAACAAAA CACAACTTGA AAACATTGTA
AATAAATATA TAGGATGA
|
|---|
| Protein sequence | MKLSTNSSLF IISAVPLMLI FVFASYFFYK SFADYSKIQS LTTQFDNSRE LNKVLEELGR
ERGLTAAFLG SGGAIGSGEV LKKQRVTTDT AISTFKRKAS EFEERGNFLS QLLGYKNEEL
KNNNAKILSL LGKLPEIRTV IDQKKPSFVN LYDEYYRNID IQYAVSQQAI SKFFTQPDIS
TWATTLANTY SSLMNTISER DYVIENIVAS RSMNTKTIQR WKDFSNASRL PVYTYLPASN
AKNEIQKILD NVETKNILND TDRLDLLLQQ DALSGQYRMS FIEWFTIMTQ KYNITKEIIV
KIDSELNKVA IANVAAGKQI LYISAVIWAF TLVLIFFSAS VSRKFSKNVK ELGKVIGRIG
ELSNQEQNID IQSSEGITKA YGLIQDALDL VTYQKEAAED ANKAKSIFLA NMSHEIRTPL
NGVIGFTELL RNTELDEEQQ DYVDTIEQSS ENLLTIINNI LDVSKIESNK VELEDILFNP
IQDFESAVEI YVAKATEKNI DILLYIDPTL IHHLYGDITK IKEVLINLMS NAVKFTPEGG
MIAVEIVRVK SDNPNEATVN FSVEDTGVGI AEDKLVNVFN AFSQADSTIT RKYGGTGLGL
TISSKYVAMM GGKLEVKSTL GKGTRFYFTL TFKETQKTNA ENMFDGIKQL SCAMFAEQSD
VMFNNIFKNY IEHFGAKISI FYDKNEFLNS ADSGKFNVLA TRFKNFDSIK DSVKLPLLLS
LKPKELQSIT ITNPNVFTIS EPVNVSKLVK VVGRISKAGA VPGLRGDSGF ESSNLKDIIQ
NSLKKQGEPE IKISEPVAEQ VIEEVSEPEI SVVQEEIKPL DISLDDNLFS QKAVETEPET
LSAESEPKIE IPVEPVVTEP VVHEPEIKVV NEVQSDEEEA AKFDEPISLV IPDETSKVKI
EPVVESVKSQ EPEVVTEEAV KPVDFEIPVE KVAAESEIVE EKIPEPEIIK SEPAIKETIK
PKTKVVTEYV DKTEIVEETI MVDEEFEEPV TTYEIVEKPE TVMVEVEEEV IEEIDDPNAA
SSGVAGGGDD VPLLKRTYNA NILIAEDNEI NQKLMKHTLS SFKANLTIVE NGLLALEARK
SGDFDLVFMD ISMPVMDGIE ATKQIKQYEQ ENNLKHIPIV AVTANALKGD RERFMSQGLD
EYCTKPIKKD ILASMLDMFI KNKRSDGAGA AAATNEPPKK IKVKRKIKKQ VPKTVIKKVK
VPKTVIKKVV KKVPKVVKKE ITKKVPVQKV VEIPVEQVST IDTFSENLNK TLNIKSDIEQ
KVESKPINAE IFKDVLLYKN NPIENRIFAS ILNHMELSVD MVESFDEFVK KVKESGYKLS
LIDDKVPNFD ASLLQNSIDL SPSDIKSVVF TDNVSKNTLK GKFNDVIKYG INKTQLENIV
NKYIG
|
|---|
| |