| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0577 |
|---|
| Symbol | |
|---|
| ID | 5408829 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 525764 |
|---|
| End bp | 526867 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640870282 |
|---|
| Product | ABC transport system permease |
|---|
| Protein accession | YP_001406165 |
|---|
| Protein GI | 154149262 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0767] ABC-type transport system involved in resistance to organic solvents, permease component |
|---|
| TIGRFAM ID | [TIGR00056] conserved hypothetical integral membrane protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCTGGATT ACGAGCATAA AAATGGAATT TTAAATATTT TTTTTAATGG AAATTTTGAT
TATAAATTAA ATCCGAAAAT CGCACATAAT TTTAAAAATA TAGTGAAAAA TTCCATAAAA
AACAGTGAAA AAATAATATT AAATTTTAAA GACGTAGAAA ATTTTGACTA TTTTTTTGCC
GTTTTTATAA AAAAATCACT TATAAAAGCA AATTATGAAA TAATAAATGA AAACGAAAAA
ATAAAAAAAA TCTTTAAAAC GCTTGAAAAT GCCGATTTTA GCGAAAATAT ACATAAGAAA
AATATAAATT TTATAATAAA AACTTTAAAT GAAATTGGTA TCGCTACAAT AGACGCGAAA
AAAAATCTAA CTAATTTAAC CTCTTTTATG GGTGAATTTT TTATAAAATT TTTCGCACTG
ACACCAAAAA AAATGCGCCT TAAAGAAATG AGTAATTGCG CAAAAGATGC AGGAATAGAT
GCTGTTTTTA TCGTATCTTT AACGGCATTT TTAGTTGGAA TAGTTTTAGC TTACATAGGC
TCGGATATGT TGGCGCAATT TGGCGCAAGC ATTTATATAA TAGACATAAT GGGAATGCTT
ACACTAAGAG AAATTGCACC TCTTATAGCA GCAATCGTAA TTGCCGGCCG TTCGGCGTCA
TCTTTTACAG CTCAAATCGG TGTTATGAAA ATTACAGAGG AGATAGATGC GATGAAAACA
ATGGGCTTTG ATCCGTTTTA TTTTCTTTGT ATGCCGCGCA TTTTAGCAAT GATTATAATA
ACGCCTTTTG TGATTTTTCT AGCTGATGCC GTCAGCATTT TTTCTCAGAT GATAGTTTGC
GATGCTTATT TGGAAATATC TTTTGCCGAC TATTTGGAGC GATTTAAAAG CACGATTGAA
ATCAGACATT TTCTGGTCGG GATTGTAAAA GCGCCGTTTT TCGGCGCGAT AATTGCGATT
GTAGGTTGTT TGCGCGGATT TGAAGTCAAA AACGACACTC AAAGTATCGG AGAATACACA
ACAATAAGCG TTGTAAATGC TATATTCTGG GTAATAGCGT TGGATGCATT TTTTGCCGTT
ATGTTTTCGG AGCTGAAAAT ATGA
|
|---|
| Protein sequence | MLDYEHKNGI LNIFFNGNFD YKLNPKIAHN FKNIVKNSIK NSEKIILNFK DVENFDYFFA
VFIKKSLIKA NYEIINENEK IKKIFKTLEN ADFSENIHKK NINFIIKTLN EIGIATIDAK
KNLTNLTSFM GEFFIKFFAL TPKKMRLKEM SNCAKDAGID AVFIVSLTAF LVGIVLAYIG
SDMLAQFGAS IYIIDIMGML TLREIAPLIA AIVIAGRSAS SFTAQIGVMK ITEEIDAMKT
MGFDPFYFLC MPRILAMIII TPFVIFLADA VSIFSQMIVC DAYLEISFAD YLERFKSTIE
IRHFLVGIVK APFFGAIIAI VGCLRGFEVK NDTQSIGEYT TISVVNAIFW VIALDAFFAV
MFSELKI
|
|---|
| |