| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0538 |
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| Symbol | |
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| ID | 5409121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Campylobacter hominis ATCC BAA-381 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009714 |
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| Strand | - |
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| Start bp | 490449 |
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| End bp | 492518 |
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| Gene Length | 2070 bp |
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| Protein Length | 689 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640870243 |
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| Product | transporter |
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| Protein accession | YP_001406126 |
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| Protein GI | 154147905 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4666] TRAP-type uncharacterized transport system, fused permease components |
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| TIGRFAM ID | [TIGR02123] TRAP transporter, 4TM/12TM fusion protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAAAAG CAAAAAAAGA CGAGCAAGTT TTAGAAGTAA AAAGTCGTGA ATTTGATTCA
CCAATTCTAT TTTGGATAAC GACTATCGTT TGTTTTTCAT GGGCGGTTTT TCAGCTTTAT
ATAGCTTATT TCCCTTTAAA TACAACAATA GCACGTTCAA TTCATTTAGC TTTTGCACTC
GGAATTATTT TTTTACTTTT TCCGCTTAAA ATTCACAAAA GCGCCAATTC GTTTATTCCA
TGGTATGATT GGATACTGGT TATTATAGGA GTTTTGGCTA CGCTTTATCC TTTTATAGAA
TTTTATGATC TGGCAAATAG ACCTGGAGAC TATCTTGTTA GAGATATAGT AGTATCGTTA
ATTGCGATTT TTATTCTTTT TGAAGCCGGT AGAAGAATGA TGGGGCCTGC ACTTGGAATA
ATCGCATTTA TATTTTTATT ATATTGCTAT TTTGGACAAT ATATGCCTGA TATTATTGCT
CACCAAGGAG CAAGTTTAAG CAAACTGGCA GGTCATATGT TTCTTACAAC AGAGGGTATT
TTCGGCGTCC CTTTAGGTGT TAGTGTAAGT TTTATATATT TATTCGTACT TTTCGGTTCA
CTTTTGGAAA GAGCCGGAGC AGGACAATAC TTTATAAATG TTGCTTTTTC GCTTTTAGGA
AGATTTCGCG GCGGTCCGGC AAAAGCTTCC GTAATCGCTA GCGGATTAAC AGGAATGGTA
AGCGGAAGTT CTACTGCAAA CGTGGTAACT GTAGGAACTT TTACGATTCC GCTTATGAAA
AAAGCAGGAC TTACCAGCGT AAAAGCCGGC GCTGTGGAAG TTGCAGCAGG AGTAAATGGA
CAACTTATGC CGCCAATTAT GGGAGCGGCA GCTTTTATAA TCGCCGAATT TTTAGGAATG
AGTTACACAA ATATAATGAT AGCAGCGGTT ATTCCTGCTT TTGCGTGTTA TGCAAGTCTA
TTTTTTATTG TACATTTAGA AAGTTGTAAA TTAGGCTTAA AAAGCAGTCC TAAAAGTGAA
ATTTCAAAAT TTAAAATTAT TTTGAGCGGA ATTCATTACA TAATACCGAT TCTGGTTTTG
CTTTATATAT TGTTAATCGC TAAAGAATCA CCGATTTCTG CAGCATTTTA TGCTATTAAC
ACTATTTTTA TAATTATGAT AATTCAAGAT CCGTTAAAAA AATTCATCAT TCACGAAAAA
ATTACAAAAG CCGATTTTTT GCGAGGTTTT AGCGATATTT TTTGGGCTAT GGTAGCAGCT
TCTAAAAATA TGGTCACAGT AGCTGTTGCA ACAGCACTTG CAGGACTTAT AATAGGTTCA
ATTTCATTAA CAGGAATTGG TCAAGTTCTA GCCGATGTAG TAGAAAAGCT TGCAGGAAAC
AACATTTTAT TGATTTTAGT TTTAACAGCT GTAATGAGCC TGATTTTAGG AATGGGGCTT
CCAACAACAG CAAATTATAT AGTAGTTTCA AGTTTGGTGG CACCGGTTAT TTTAATGCTT
GCAGGCAAAA ATGATTTTAT AATTCCTGCA ATTGCCGTGC ATTTATTTGT ATTTTATTTT
GGAATTTTAG CCGATGACAC GCCGCCTGTT GGAATTGCGG CATACGCAGC AGCCGGAATT
GCAAAAGCAA ATCCTGTTAC GGTCGGACTT CAAGGATTTT TTTATGATTT ACGAACTACG
ATTTTACCAT TTGCATTTTT CTTCAACAAC AAATTGCTTT TAATCGAATC AGTAGGCAAT
CCGTATGATC CTTTGACAAT CGTTTGGATA AGCGATCCTT TAACTATTTT ACTTATTTTT
TCAATGGCAT TGATTGGAAT TTTTGCATTT TCAAGCGCGC TGCAAGGTTG GCTTGTAACA
CGTTGCAATG TAATTGAACG TATTTTAATG CTTATAATCA CACCTCTTTG CTTAGTTCCA
AATATATGTG TAAAATATTT TGATTTTATA AACGATGAAT GCACATCATA CATTATAGGA
ACGACAATTT TTGCAATAAT CTTTGCAAAA CAATGGATAA TCAGTTCAAA AAATCCGTCA
CTTAGAAGCG GAACACCAAA AGCGATATAA
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| Protein sequence | MEKAKKDEQV LEVKSREFDS PILFWITTIV CFSWAVFQLY IAYFPLNTTI ARSIHLAFAL
GIIFLLFPLK IHKSANSFIP WYDWILVIIG VLATLYPFIE FYDLANRPGD YLVRDIVVSL
IAIFILFEAG RRMMGPALGI IAFIFLLYCY FGQYMPDIIA HQGASLSKLA GHMFLTTEGI
FGVPLGVSVS FIYLFVLFGS LLERAGAGQY FINVAFSLLG RFRGGPAKAS VIASGLTGMV
SGSSTANVVT VGTFTIPLMK KAGLTSVKAG AVEVAAGVNG QLMPPIMGAA AFIIAEFLGM
SYTNIMIAAV IPAFACYASL FFIVHLESCK LGLKSSPKSE ISKFKIILSG IHYIIPILVL
LYILLIAKES PISAAFYAIN TIFIIMIIQD PLKKFIIHEK ITKADFLRGF SDIFWAMVAA
SKNMVTVAVA TALAGLIIGS ISLTGIGQVL ADVVEKLAGN NILLILVLTA VMSLILGMGL
PTTANYIVVS SLVAPVILML AGKNDFIIPA IAVHLFVFYF GILADDTPPV GIAAYAAAGI
AKANPVTVGL QGFFYDLRTT ILPFAFFFNN KLLLIESVGN PYDPLTIVWI SDPLTILLIF
SMALIGIFAF SSALQGWLVT RCNVIERILM LIITPLCLVP NICVKYFDFI NDECTSYIIG
TTIFAIIFAK QWIISSKNPS LRSGTPKAI
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