Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CHAB381_0516 |
Symbol | |
ID | 5408173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Campylobacter hominis ATCC BAA-381 |
Kingdom | Bacteria |
Replicon accession | NC_009714 |
Strand | + |
Start bp | 473055 |
End bp | 473954 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640870221 |
Product | periplasmic solute binding protein |
Protein accession | YP_001406104 |
Protein GI | 154149361 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0803] ABC-type metal ion transport system, periplasmic component/surface adhesin |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAAAAA TTTTAGTTTT TTTGGCTTTT AGCGGTTTGC TTTTTGCAAA ACCAATTGTT ACGACGACTA TTTTGCCTAC AAAATTTTTT ATTGAGCAGA TAGCTGGCGA TGAAATTTCG GTAAATACAA TGATAGAAAA AGGTGCCGAT CCACATACTT ATGAGCCGAA ACCGTCTCAA ATGAAAAATC TTGAAAAAAG TGAGCTTTAT TTTTCCGTCG GAGTCGAATT TGATGAAATT TGGTTGCCGA AAATAGCTGA AAATTTTCCT GATTTAAAAA TCATAAAAAC CGATGATAAA ATAGAAAAAA TCGCAATGTC CGAGCATCAT CATGACGAAC ATGTGAATGA AGAAAATTTC CATGACGAAA ATGCAGTTAA ACACCACTGC GAAACAAACG AAAAACACCA TCACCACGGA CTTGATCCGC ACATTTGGCT TGATCCTGTT TTAGTTAAAA CTCAAGTTGA AACGATTAAG TTCGCTTTAA TTAATAAATT TCCTGATAAA AAGGAAATTT TTGAAAAAAA TGCAAATGAA TTTTTAAAAA AACTTGATGA GTTTGATAAA TTCGCCGCTG CAAAATTAGG CGCATTAAAA AATAGAAATT TTATCGTATA TCATCCAAGC TGGGGATATT TCGCTAAAAG ATACTCTCTT AATCAAATCG CAATTGAAAT AGAGGGAAAA GAGCCAAAAC CTGCCGAGCT TGAGGAATTG ATTGAAGAGG CAAAAGAGGA AAATGTTCGC GTGATTTTTG TAGCGCCACA ATTTTCAAAA AATTCGGCTA AATCAATCGC AAAAGCTACA AATGCGGCGG TGATTGAAAT TGATCAATTA CCTGAAAACT GGCTTAGTGA GATGAAAAAA ACGGTAGAAA TTTTTGCCGA AAATTTATAA
|
Protein sequence | MKKILVFLAF SGLLFAKPIV TTTILPTKFF IEQIAGDEIS VNTMIEKGAD PHTYEPKPSQ MKNLEKSELY FSVGVEFDEI WLPKIAENFP DLKIIKTDDK IEKIAMSEHH HDEHVNEENF HDENAVKHHC ETNEKHHHHG LDPHIWLDPV LVKTQVETIK FALINKFPDK KEIFEKNANE FLKKLDEFDK FAAAKLGALK NRNFIVYHPS WGYFAKRYSL NQIAIEIEGK EPKPAELEEL IEEAKEENVR VIFVAPQFSK NSAKSIAKAT NAAVIEIDQL PENWLSEMKK TVEIFAENL
|
| |