Gene CHAB381_0500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0500 
SymbolprfB 
ID5408959 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp458733 
End bp459827 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content35% 
IMG OID640870205 
Productpeptide chain release factor 2 
Protein accessionYP_001406088 
Protein GI154148037 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1186] Protein chain release factor B 
TIGRFAM ID[TIGR00020] peptide chain release factor 2 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGATAATT ACGAATACAG CGAACTTTTA AAAGAGTTAA AAAACAAAAT TTCAAATGTA 
GAAGCAATTA TTAAGCCTAA AATTTTAATG ACGCGTTTAG CTGAAATAGA AAAAACAGAG
CAAGATCCTG CACTTTGGGT TGATGCAAAA AAAGCGGCTC AAATAGGACG AGAAAAAACA
AAAATTTCAA ATATCTTAGC AAAATTTAAA AAAGCACAAA ACGAATTAAA CGATGCGAAG
GAATTTTACG AATTAGCCGT AAGTGAAAAC GACGGCGAAA CGATAAACGA ACTTTTTAGA
GAATCTGCAA AATTAAGTGA AAATATTGCG AATTTAGAGC TTTCAATGAT GCTTAGCGGC
GAAAATGACG ATAAAAATGC TATTATAAAT ATTCATCCCG GAGCAGGCGG AACGGAAGGT
GAAGATTGGG CAGGAATGCT TTATAGAATG TATGTTAGAT TTTGTGAGCG GGTAGGATAC
AAAATAGAAA TTTTAGATTT TCAAGAAGGC GATGAAGCAG GAATCAAAGA TGTGAATTTC
ATAGTAAAAG GCGAAAATGC TTACGGATAT TTAAAAGTGG AAAGCGGAAT TCATAGACTT
GTAAGAATAA GCCCTTTTGA TAGTGCAGGA AGACGCCATA CAAGTTTTGC AAGTGTAGTT
GTAAGCCCTG AACTAGATGA CGATATACAA ATAAATATAG ATGAAAAAGA TCTAAGAATA
GATTATTATC GCTCAAGCGG CGCAGGCGGC CAACACGTAA ATAAAACGGA AAGCGCCGTA
AGAATAACGC ATATACCGAC AAATATCGTA GTACAATGTC AAAACGATCG CGATCAGCAC
AAAAACAAGG CAAGCGCTAT GAAAGTGCTT AAATCCCGTC TTTATGAGCT TGAAAAACTT
AAAAAGCAGG AAGAATCAAA CAAAACGCCA AAAAGCGATA TAGCGTGGGG TTATCAAATT
AGAAATTACG TGCTTTTTCC ATATCAGCAA GTAAAAGATT TACGTTCAAA TATAGCTTAT
TCACAAGCGG AAGCAATATT AGACGGCGAT ATAAAAAAAA TATTGGAAGA TGTATTAATC
AACAATCAAT CTTAA
 
Protein sequence
MDNYEYSELL KELKNKISNV EAIIKPKILM TRLAEIEKTE QDPALWVDAK KAAQIGREKT 
KISNILAKFK KAQNELNDAK EFYELAVSEN DGETINELFR ESAKLSENIA NLELSMMLSG
ENDDKNAIIN IHPGAGGTEG EDWAGMLYRM YVRFCERVGY KIEILDFQEG DEAGIKDVNF
IVKGENAYGY LKVESGIHRL VRISPFDSAG RRHTSFASVV VSPELDDDIQ INIDEKDLRI
DYYRSSGAGG QHVNKTESAV RITHIPTNIV VQCQNDRDQH KNKASAMKVL KSRLYELEKL
KKQEESNKTP KSDIAWGYQI RNYVLFPYQQ VKDLRSNIAY SQAEAILDGD IKKILEDVLI
NNQS