| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0480 |
|---|
| Symbol | serA |
|---|
| ID | 5409141 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 439220 |
|---|
| End bp | 440797 |
|---|
| Gene Length | 1578 bp |
|---|
| Protein Length | 525 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640870185 |
|---|
| Product | D-3-phosphoglycerate dehydrogenase |
|---|
| Protein accession | YP_001406068 |
|---|
| Protein GI | 154147887 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0111] Phosphoglycerate dehydrogenase and related dehydrogenases |
|---|
| TIGRFAM ID | [TIGR01327] D-3-phosphoglycerate dehydrogenase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGACAA TAATTATTTG TGACCCGATT TATAAAGTCG GGTACGAATT ATTAGAAAAA
GAAAAAGATA TAAAAGTAAT AGATGCTTCA ACCGTTTCTA AAAATGAACT TTTAGATATG
GTAGGAGATG CCGATGTCGC AATAACAAGA AGTCCGACAC CGGTAGATAA AAATTTTTTA
CAGGCCGGAA AAAAATTAAA AGCAATTGTT AGAGCTGGGG TTGGCGTAGA CAACTGTGAT
ATAGATGAAT GTTCAAGGCG TGGAATCGTT TTAATGAATG TACCTACTGC AAATACAATC
GCAGCAGTAG AAATGACAAT GTGCCATTTG CTGAATTCAG CTCGTAAATA TGTAAACTCT
TGCAATGATT TAAAACTCAA CCATACATGG AAACGCGAAA AATGGTACGG AACCGAAATT
TATAAAAAAT CTCTTGGAAT TATAGGTTTT GGAAATATCG GCTCTCGCGT AGCGGTGCGT
GCAATAGCAT GCGGTATGAG TGTCATAACT TATGATCCAT ACATAGATCC GAGCAAAGCA
ACAAATATCG GTGTGCGCTA CACTACAAAT CTTGATGAAA TTTTAGCTTG TGATTTTATA
ACTATTCATA CACCGAAAAC AAAAGAAACA ATAGGAATGA TAGGCGATAA AGAAATCGCT
AAAATGAAAG ACGGCGTTAG ACTTATAAAC TGCGCACGCG GCGGGCTTTA TAATGAAAAT
GCTTTAATCA ATGGTTTAAA AAGCGGTAAA ATAGCATATC TTGGCATGGA TGTTTTTGAA
AAAGAACCGG CTACTCAAAA CGAACTTTTA GAATTCGAGA ATTTAACTGC CACACCGCAT
CTTGGCGCAA ATACTGTAGA ATCTCAAAGC AACATTGCAA CTGAAGCCGT TGAGCAAGCA
ATAAGCGCAG CCAGAGGACT TTGCTATCCA AATGCTCTGA ACTTACCTAT AAAAACAGAT
AATTTACCTG ATTTTGTTGA ACCTTATATG AACCTGGTTT CAAAAATGGC TTATATGGCT
GCCCAAATTG ATAAAAACCA AATAAAAGCT ATTAAACTTG AAGGTAATGG AAAAGTTGTA
GATTACTTAA ATTCTATGCT TGTTTTTGCT GTATACGGAG CACTTAAAGA AAAATTCGGC
GAAAAAGTCA ATTATGTAAA TGCGATATTT ACAGCCGACG AAAAAGGAAT TAAAACAGAA
TCAGCAATCT TAAACGAAGA TAACTATAAA AATAAAGTTT GTGTAAAAAT TACAACTGAT
AAAGGTGTAA CTGCAATCAG CGGAACCGTT TTTAATGACG ACGAAGAGAG AATTTTAAAT
ATCGACGGCT TTAAAACAGA TTTCAAACCG AAAGGTAAAA TGATAATATT TAAAAATACC
GATGTTCCAG GAGTTATCGC AAGCGTCAGC GCGATTTTGG CAAAAGATAA AATCAATATT
GCAGATTTTA GACTAGGTCG CGGAGAAGAC GGAAACGCAC TTGCTGTAAT TCTAGTAGAT
GAAGATATAA GCAAAAGCGT ACTTGACGAA CTTTCAGCAC TTTCTACTTG CCTACTTGCT
CGTTATGTAG TACTTTAA
|
|---|
| Protein sequence | MKTIIICDPI YKVGYELLEK EKDIKVIDAS TVSKNELLDM VGDADVAITR SPTPVDKNFL
QAGKKLKAIV RAGVGVDNCD IDECSRRGIV LMNVPTANTI AAVEMTMCHL LNSARKYVNS
CNDLKLNHTW KREKWYGTEI YKKSLGIIGF GNIGSRVAVR AIACGMSVIT YDPYIDPSKA
TNIGVRYTTN LDEILACDFI TIHTPKTKET IGMIGDKEIA KMKDGVRLIN CARGGLYNEN
ALINGLKSGK IAYLGMDVFE KEPATQNELL EFENLTATPH LGANTVESQS NIATEAVEQA
ISAARGLCYP NALNLPIKTD NLPDFVEPYM NLVSKMAYMA AQIDKNQIKA IKLEGNGKVV
DYLNSMLVFA VYGALKEKFG EKVNYVNAIF TADEKGIKTE SAILNEDNYK NKVCVKITTD
KGVTAISGTV FNDDEERILN IDGFKTDFKP KGKMIIFKNT DVPGVIASVS AILAKDKINI
ADFRLGRGED GNALAVILVD EDISKSVLDE LSALSTCLLA RYVVL
|
|---|
| |