Gene CHAB381_0452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0452 
Symbol 
ID5409129 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand+ 
Start bp409122 
End bp409802 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content35% 
IMG OID640870157 
Productaspartate racemase 
Protein accessionYP_001406048 
Protein GI154148024 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1794] Aspartate racemase 
TIGRFAM ID[TIGR00035] aspartate racemase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.00000396457 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAATTGG TTGGAATTAT CGGCGGAATG GGACCTTTGG CTACTATTGA TCTTTATAAA 
AAAGTAGTTT TTTTGACAAA TGCGAAAAGC GATCAGGAAA ATATACCATT GATAATAGAT 
AACAATACTC TTATACCGGA TAGAACAGCG TATATTCTTG GCGCCAAAGA AGATCCTTTT 
GCTGAGCTTT TAAAAAGCGC TAAAAGGCTT AAACAAAGTG GTTGTGATGC GTTTTGTATG 
GCTTGTAATA CGGCGCATTT TTTTGCAGAC AGATTAGTTG AGCAAAGCGG CTTGCCGATA 
CTTCATATCG CAAAAATAAC CGTTAATGCG ATAAAAAAAG AGTATAAAAA TGTAAAAAAA 
GTAGCCGTTC TATCAACTAT CGGCACACAA AAAGCCGGAA TTTACGATAA CGAATTGAAA 
AAAAACGGCT TTTTGACGGC TGATATATCG CAAATTGCGA TGAAAAAACT GATGAGCTGC 
ATTTATGACG GTGTAAAAGC CGGGAAAATT GAAGATTTTG TTCCTAAATT TAAGGAAATT 
TTAAATGAAA TTGATGCCGA TATTTATATC GCCGCATGCA CGGAAATTCC GTTATTTTTG 
CCATATATCG GCGATGATAA AATTATCATT GATGCTACAA ATGAGCTAGC AAAAGAGATT 
ATCAGATTTA CTAAAAGCTA A
 
Protein sequence
MKLVGIIGGM GPLATIDLYK KVVFLTNAKS DQENIPLIID NNTLIPDRTA YILGAKEDPF 
AELLKSAKRL KQSGCDAFCM ACNTAHFFAD RLVEQSGLPI LHIAKITVNA IKKEYKNVKK 
VAVLSTIGTQ KAGIYDNELK KNGFLTADIS QIAMKKLMSC IYDGVKAGKI EDFVPKFKEI 
LNEIDADIYI AACTEIPLFL PYIGDDKIII DATNELAKEI IRFTKS