| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CHAB381_0403 |
|---|
| Symbol | |
|---|
| ID | 5408251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Campylobacter hominis ATCC BAA-381 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009714 |
|---|
| Strand | - |
|---|
| Start bp | 366341 |
|---|
| End bp | 367006 |
|---|
| Gene Length | 666 bp |
|---|
| Protein Length | 221 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 640870111 |
|---|
| Product | transcriptional activator protein CopR |
|---|
| Protein accession | YP_001406002 |
|---|
| Protein GI | 154148866 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.100907 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAAAACT TAATTGCTAT TATTGACGAT GAACTTGATT TGCTTGAGCT TCTGGAATAC
AATCTTGAAA AAGCCGGATT TGATGCGATA GGATTTTTAA ATACAAATAA AATTGAACAA
TTTTTAAACG AAGAAGATGT GGATTTACTT ATCGTAGATA GAAATTTGCC AGGTATTGAA
GGAAGTAAAT TCGTAGAAAA TTTACGCGCA AAAGGATACA ACACGCCGGT TATTTTCTTA
ACTGCAAAAA CAAGCAAAGA AGAGCAAATG CAAGGTTTTG GCGTAGGTGG GGATGATTAT
ATAACAAAGC CGTTTGATTT GGATAATCTA ATCGCAAGAA TAAAAGCTGT ATTAAAACGC
ACACAAAAAA GCGCCGAAAT TTATAAATTT AAAGATATAC TTATAAACTC GACAAGCGCA
AAAACATTCA TAAACGATAA AGAAATCGAA TTAACGAAAC TGGAAACTTC ACTTTTGACA
GAATTTATAA AAAACAAATC GATCGTTTTA AACCGCGAAT ATTTAGCTGA AAGCGTATGG
CACGATACAG ATACGTCAAA ACAAACTATA AATATCGCCA TAAAACGTTT AAGAGATAAA
ATCGATCCCA AAAAAGAGAA AAATTATATA AAAGTAATTC GCGGCGAAGG ATATGAACTG
TGCTGA
|
|---|
| Protein sequence | MQNLIAIIDD ELDLLELLEY NLEKAGFDAI GFLNTNKIEQ FLNEEDVDLL IVDRNLPGIE
GSKFVENLRA KGYNTPVIFL TAKTSKEEQM QGFGVGGDDY ITKPFDLDNL IARIKAVLKR
TQKSAEIYKF KDILINSTSA KTFINDKEIE LTKLETSLLT EFIKNKSIVL NREYLAESVW
HDTDTSKQTI NIAIKRLRDK IDPKKEKNYI KVIRGEGYEL C
|
|---|
| |