Gene CHAB381_0348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0348 
Symbol 
ID5409186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand
Start bp313419 
End bp314459 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content31% 
IMG OID640870057 
ProductABC-type multidrug transport system permease component 
Protein accessionYP_001405950 
Protein GI154148031 
COG category[V] Defense mechanisms 
COG ID[COG0842] ABC-type multidrug transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGATTTC TTTCGCTCAT TAAAAAAGAA TTTTTATCTA TTAAAAATGA TAGAAAAAGC 
GCCGTAATTG TTTTTATTTT TCCGTTTTTA CTTACTTTTT TATTTGCAAA TTCAGTAAAT
TTCGAAGTAA ACAATATCTC TTTGGGCGTT TTAAATTTCA GCAATTCCAA AGAGAGTGAA
CGAATTTTGA AAAATTTTGA AGGCACAAAA CGCATAAGCA AAATTTATAT GCTTACAAGT
TTTGAAGAGG CAAAAATTTT AATCGATAGC GAAAAAATTA CTACTTTGGT GATTTTTAAT
GAAGATTTTG CAAGAAATAA AAAGGTCGAA GTTATTGTTG ACGGACGCAA TTCAAACGCT
TCTCAAATCA CTTTAGGCTA TATAACTTCT ATGATAAATG AACCTCAATT CATCAAAATT
CGCTATTTAT ATAATCCGAA TGTTGAAAAT TTCTGGTGGA TTTTACCGAA TTTAATAGGA
CTTATTTCAA TGGCGATTTG CGTAATTATG ACTGCGATGT CGATTCCTAG AGAACTTGAA
CTTGGAACAA TGGAACAAAT TCTGGTTTCT CCGCTTAAAC ATTTTGAAAT TTTGCTTGGA
AAATTGACAA CCGCGTTTTT AATCGGACTT ATTATTTCAT TTGTAATTTT TATTTTGATG
ATAACGGTTT TTGATGTTCC GTTTTTCGGC AGTTTTTGGC TTCTGTTTTT TGGAATTTCC
GTGTTTGTTT TCAGCACCTG CGCTACAGGA ATTGCAATTT CAGTGTTTGC AAAAACGCAA
CAGCAGGCGA TTTTATACTC TTGCTCTTAT TTCGTTCCTT CCATTTTACT TTCGGGTTTT
GCCACACCTA TAGAAAATAT GCCAAGCTGG CTAATTCCGG TGGCAAATTG TTTTCAACTT
AAACATTATG CTATTTTTAT AAAATCGGTT ATTTTAAAAG ATACGGCTTT TACTGCGCTG
TTGCCGGAAC TTTCGGTTAT GCTGGTTTTA GGAATTTTTT ATTTTATTCT TTCATTTATA
TTATTTAAAA AGAGGTTTTA A
 
Protein sequence
MRFLSLIKKE FLSIKNDRKS AVIVFIFPFL LTFLFANSVN FEVNNISLGV LNFSNSKESE 
RILKNFEGTK RISKIYMLTS FEEAKILIDS EKITTLVIFN EDFARNKKVE VIVDGRNSNA
SQITLGYITS MINEPQFIKI RYLYNPNVEN FWWILPNLIG LISMAICVIM TAMSIPRELE
LGTMEQILVS PLKHFEILLG KLTTAFLIGL IISFVIFILM ITVFDVPFFG SFWLLFFGIS
VFVFSTCATG IAISVFAKTQ QQAILYSCSY FVPSILLSGF ATPIENMPSW LIPVANCFQL
KHYAIFIKSV ILKDTAFTAL LPELSVMLVL GIFYFILSFI LFKKRF