Gene CHAB381_0240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0240 
SymboldapE 
ID5408508 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand+ 
Start bp220262 
End bp221365 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content37% 
IMG OID640869952 
Productsuccinyl-diaminopimelate desuccinylase 
Protein accessionYP_001405846 
Protein GI154149534 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases 
TIGRFAM ID[TIGR01246] succinyl-diaminopimelate desuccinylase, proteobacterial clade 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATT TTGACAGTAT GGAAATTTTA AATGAGCTTT TGAAATTTCA ATCCATTACA 
CCTGATGATG ACGGCGCTTT TAACTATATT TCAATGATTT TAAACGATTT TGAAGAAATT 
AATATTGATA AAAACGGCGT TAAAAACGTG ATTTTTCGAA AAACTTTCGG TCCTGGAGTG 
CATATTTGCT TTGCAGGTCA TATTGACGTC GTAAAACCCG GAATCGGTTG GGATAGCGAT 
CCGTTTGATC CTTTGCAAAA AGACGGTTTT ATATATGCAC GCGGCGCACA AGATATGAAA 
AGCGCCGTAG CTTCGATGAT TTGTGCGGTT TCCGGGGTGC AAAATTTTAA TGGCACTATT 
AGTCTGCTTC TTACAAGCGA CGAAGAAGGA GATGCTGTTT TTGGGACGCG TGAAGCTTTA 
AAATTTTTAC AATCTCGAGG TGAACTTCCT GATTTTGCGG TTGTCGGAGA ACCTACTTGT 
GAAACCGTTT TCGGCGATAC GATAAAGGTC GGAAGAAGAG GTTCTATAAA TGGGATTTTA 
CGAATAAACG GAATTCAAGG ACACGTAGCA TATCCAAATA AATGCGTAAA TCCGGTGCAT 
ATTTTGGCAA GTAAATTTGC AAATTTTGCA GGACATGATT TTGATAACGG AAATGATTTT 
TTTGAACCGA GCAAACTTGT GGTTGTTGAT ATCAGGGGCG GTATGCAGGT ATGCAATGTA 
ACGCCAAGCG ATGTCAGTGT TATGTTTAAT GTAAGAAACT CAAATTTAAC GGATGCAAAC 
GATATTAAAA ATTTTATAAA CGATTTGTAT AAAGATTGTG ATTTTGATCT TAATTTAAAA 
GTTAGCTCTA ATCCCTTTTT GACGGATAAA AACTCAAAAA TCGTGCAAAA GTTAAGCCAA 
AGCGTGCAAA AAATTTCAGG TGTTTGTCCT GTTTTCACTA CAGGCGGCGG CACAAGTGAT 
GCAAGATATT TTGCCGAGTT TAATGTCGAT GTTGCCGAGT TCGGTGTTAT AAACGACAGA 
TTGCACGCTG TAAATGAACG GGTAAGTGTA AATGAAGTGC AAAAATTAAC TGAAATTTAT 
AAAGATTTGA TTGAAAATTT TTAA
 
Protein sequence
MRHFDSMEIL NELLKFQSIT PDDDGAFNYI SMILNDFEEI NIDKNGVKNV IFRKTFGPGV 
HICFAGHIDV VKPGIGWDSD PFDPLQKDGF IYARGAQDMK SAVASMICAV SGVQNFNGTI 
SLLLTSDEEG DAVFGTREAL KFLQSRGELP DFAVVGEPTC ETVFGDTIKV GRRGSINGIL 
RINGIQGHVA YPNKCVNPVH ILASKFANFA GHDFDNGNDF FEPSKLVVVD IRGGMQVCNV 
TPSDVSVMFN VRNSNLTDAN DIKNFINDLY KDCDFDLNLK VSSNPFLTDK NSKIVQKLSQ 
SVQKISGVCP VFTTGGGTSD ARYFAEFNVD VAEFGVINDR LHAVNERVSV NEVQKLTEIY 
KDLIENF