Gene CHAB381_0205 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCHAB381_0205 
SymbolrpoA 
ID5408470 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCampylobacter hominis ATCC BAA-381 
KingdomBacteria 
Replicon accessionNC_009714 
Strand- 
Start bp183337 
End bp184353 
Gene Length1017 bp 
Protein Length338 aa 
Translation table11 
GC content33% 
IMG OID640869918 
ProductDNA-directed RNA polymerase subunit alpha 
Protein accessionYP_001405812 
Protein GI154149371 
COG category[K] Transcription 
COG ID[COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit 
TIGRFAM ID[TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.941969 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAA TCACAACATC AGCTTATATG CCAACTGAAA TTGAAGTTGA AAATGTCAGC 
GAAAATGTTG CTAAAATTAT AGCTTATCCA TTTGAAACGG GATATGCGGT TACTCTTGCA 
CACCCTTTAA GAAGACTTCT TTATACAAGT ACAGTCGGTT ATGCGCCGAC TGCCGTTAAA 
ATTGACGGTG TTAGTCATGA ATTTGACAGT ATGAGAGGTA TGCTTGAAGA TGTCGCAATT 
TTTATTATAA ATCTAAAAGG AATAAGATTT AAGATAAAAG GTGATTCAAA AAGAGAAGTT 
ATCGAATACA ATTTTACCGG TCCAAAAGAA ATTACAGGCA AAGATTTAAA TAACGATATT 
GTAGAAATAG TAAATCCTGA TGCTTATTTG GCAACAATAA ACGAAGATGC GGATTTGAAA 
TTTAGCGTTG TAATAGAAAA AGGAATCGGA TATGTGCCGA GTGAATCTAT TAGAGATTAT 
GTAAGTAGCG ATTATATTGC GCTTGATGCA TTCTTTACAC CTGTAATTCG CGCTATTTAT 
GATATAGAAA ATGTATTCGT AGAAGATAAT CCCGATTATG AAAAAATCAT TTTTACAATC 
ACAACCGACG GTCAAGTAAG TGCGGTTGAC GCATTCAAAA ATGCACTTGA AGCAATGTAT 
CAACAAATGT CAGTTTTCAA AGGCATTGTA GATATCGATA CCGGCAAAAG TTTCACAAAA 
CAAATTCCAA GCGGTGAACA TTCAAAACTT TTTGAAAGCA TTGAAAATTT AAATTTGAGC 
GCAAGAAGCT TTAATTGTTT GGAAAAAGCG GATATCAAAT TTGTCGGTGA AATTGTTATT 
ATGGACGAAA GCGAATTAAA AGGTATTAAA AATTTAGGTA AAAAATCTCT CGAAGAAATT 
AAATCCGTTA TGGAAGAAAT CGGTTATCCG ATAGGAAATG AAGAGATTAA AGACAAAAAA 
GAAGTGCTTA GCAAAAAAAT AGCTGAGCTT AAAAAGAAAG CTAAGGATGA TAAATGA
 
Protein sequence
MRKITTSAYM PTEIEVENVS ENVAKIIAYP FETGYAVTLA HPLRRLLYTS TVGYAPTAVK 
IDGVSHEFDS MRGMLEDVAI FIINLKGIRF KIKGDSKREV IEYNFTGPKE ITGKDLNNDI 
VEIVNPDAYL ATINEDADLK FSVVIEKGIG YVPSESIRDY VSSDYIALDA FFTPVIRAIY 
DIENVFVEDN PDYEKIIFTI TTDGQVSAVD AFKNALEAMY QQMSVFKGIV DIDTGKSFTK 
QIPSGEHSKL FESIENLNLS ARSFNCLEKA DIKFVGEIVI MDESELKGIK NLGKKSLEEI 
KSVMEEIGYP IGNEEIKDKK EVLSKKIAEL KKKAKDDK